Gene : Thecc1EG041953 T. cacao v1.1
Defline:  (1 of 2) PTHR11177//PTHR11177:SF190 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  3267
Name:  ? Thecc1EG041953 Secondary Identifier:  ? PAC:27426798
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6902 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041953 0.5kb upstream 0.5kb upstream 1332 true scaffold_9: 40302967-40304298 Theobroma cacao
Thecc1EG041953 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40303799-40304298 Theobroma cacao
Thecc1EG041953 0.5kb downstream 0.5kb downstream 1332 true scaffold_9: 40302467-40303798 Theobroma cacao
Thecc1EG041953 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40302467-40302966 Theobroma cacao
Thecc1EG041953 1.0kb upstream 1.0kb upstream 1832 true scaffold_9: 40302967-40304798 Theobroma cacao
Thecc1EG041953 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40303799-40304798 Theobroma cacao
Thecc1EG041953 1.0kb downstream 1.0kb downstream 1832 true scaffold_9: 40301967-40303798 Theobroma cacao
Thecc1EG041953 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40301967-40302966 Theobroma cacao
Thecc1EG041953 2.0kb upstream 2.0kb upstream 2832 true scaffold_9: 40302967-40305798 Theobroma cacao
Thecc1EG041953 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40303799-40305798 Theobroma cacao
Thecc1EG041953 2.0kb downstream 2.0kb downstream 2832 true scaffold_9: 40300967-40303798 Theobroma cacao
Thecc1EG041953 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40300967-40302966 Theobroma cacao
Thecc1EG041953 5.0kb upstream 5.0kb upstream 5832 true scaffold_9: 40302967-40308798 Theobroma cacao
Thecc1EG041953 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40303799-40308798 Theobroma cacao
Thecc1EG041953 5.0kb downstream 5.0kb downstream 5832 true scaffold_9: 40297967-40303798 Theobroma cacao
Thecc1EG041953 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40297967-40302966 Theobroma cacao
Thecc1EG041953 10.0kb upstream 10.0kb upstream 10832 true scaffold_9: 40302967-40313798 Theobroma cacao
Thecc1EG041953 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40303799-40313798 Theobroma cacao
Thecc1EG041953 10.0kb downstream 10.0kb downstream 10832 true scaffold_9: 40292967-40303798 Theobroma cacao
Thecc1EG041953 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40292967-40302966 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823739 5264 Brassicales-Malvales View MSA
124319802 5266 SBM View MSA
124248490 5268 Malvidae View MSA
124051168 5270 Rosid View MSA
123757988 5271 Pentapetalae View MSA
122778989 5272 Eudicot View MSA
122051321 5273 Angiosperm View MSA
121348698 5274 Embryophyte View MSA
123380978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain