Gene : Thecc1EG041938 T. cacao v1.1
Defline:  (1 of 3) PTHR24093//PTHR24093:SF289 - FAMILY NOT NAMED // CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE-RELATED Genomic Order:  3253
Name:  ? Thecc1EG041938 Secondary Identifier:  ? PAC:27428553
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041938 0.5kb upstream 0.5kb upstream 7119 true scaffold_9: 40225022-40232140 Theobroma cacao
Thecc1EG041938 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40225022-40225521 Theobroma cacao
Thecc1EG041938 0.5kb downstream 0.5kb downstream 7119 true scaffold_9: 40225522-40232640 Theobroma cacao
Thecc1EG041938 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40232141-40232640 Theobroma cacao
Thecc1EG041938 1.0kb upstream 1.0kb upstream 7619 true scaffold_9: 40224522-40232140 Theobroma cacao
Thecc1EG041938 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40224522-40225521 Theobroma cacao
Thecc1EG041938 1.0kb downstream 1.0kb downstream 7619 true scaffold_9: 40225522-40233140 Theobroma cacao
Thecc1EG041938 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40232141-40233140 Theobroma cacao
Thecc1EG041938 2.0kb upstream 2.0kb upstream 8619 true scaffold_9: 40223522-40232140 Theobroma cacao
Thecc1EG041938 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40223522-40225521 Theobroma cacao
Thecc1EG041938 2.0kb downstream 2.0kb downstream 8619 true scaffold_9: 40225522-40234140 Theobroma cacao
Thecc1EG041938 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40232141-40234140 Theobroma cacao
Thecc1EG041938 5.0kb upstream 5.0kb upstream 11619 true scaffold_9: 40220522-40232140 Theobroma cacao
Thecc1EG041938 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40220522-40225521 Theobroma cacao
Thecc1EG041938 5.0kb downstream 5.0kb downstream 11619 true scaffold_9: 40225522-40237140 Theobroma cacao
Thecc1EG041938 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40232141-40237140 Theobroma cacao
Thecc1EG041938 10.0kb upstream 10.0kb upstream 16619 true scaffold_9: 40215522-40232140 Theobroma cacao
Thecc1EG041938 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40215522-40225521 Theobroma cacao
Thecc1EG041938 10.0kb downstream 10.0kb downstream 16619 true scaffold_9: 40225522-40242140 Theobroma cacao
Thecc1EG041938 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40232141-40242140 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837198 5264 Brassicales-Malvales View MSA
124345345 5266 SBM View MSA
124251610 5268 Malvidae View MSA
124070166 5270 Rosid View MSA
123740324 5271 Pentapetalae View MSA
122794495 5272 Eudicot View MSA
122046254 5273 Angiosperm View MSA
121349492 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain