Gene : Thecc1EG042153 T. cacao v1.1
Defline:  (1 of 1) PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Genomic Order:  3431
Name:  ? Thecc1EG042153 Secondary Identifier:  ? PAC:27427908
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5980 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042153 0.5kb upstream 0.5kb upstream 3527 true scaffold_9: 41281261-41284787 Theobroma cacao
Thecc1EG042153 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 41284288-41284787 Theobroma cacao
Thecc1EG042153 0.5kb downstream 0.5kb downstream 3527 true scaffold_9: 41280761-41284287 Theobroma cacao
Thecc1EG042153 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 41280761-41281260 Theobroma cacao
Thecc1EG042153 1.0kb upstream 1.0kb upstream 4027 true scaffold_9: 41281261-41285287 Theobroma cacao
Thecc1EG042153 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 41284288-41285287 Theobroma cacao
Thecc1EG042153 1.0kb downstream 1.0kb downstream 4027 true scaffold_9: 41280261-41284287 Theobroma cacao
Thecc1EG042153 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 41280261-41281260 Theobroma cacao
Thecc1EG042153 2.0kb upstream 2.0kb upstream 5027 true scaffold_9: 41281261-41286287 Theobroma cacao
Thecc1EG042153 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 41284288-41286287 Theobroma cacao
Thecc1EG042153 2.0kb downstream 2.0kb downstream 5027 true scaffold_9: 41279261-41284287 Theobroma cacao
Thecc1EG042153 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 41279261-41281260 Theobroma cacao
Thecc1EG042153 5.0kb upstream 5.0kb upstream 8027 true scaffold_9: 41281261-41289287 Theobroma cacao
Thecc1EG042153 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 41284288-41289287 Theobroma cacao
Thecc1EG042153 5.0kb downstream 5.0kb downstream 8027 true scaffold_9: 41276261-41284287 Theobroma cacao
Thecc1EG042153 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 41276261-41281260 Theobroma cacao
Thecc1EG042153 10.0kb upstream 10.0kb upstream 13027 true scaffold_9: 41281261-41294287 Theobroma cacao
Thecc1EG042153 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 41284288-41294287 Theobroma cacao
Thecc1EG042153 10.0kb downstream 10.0kb downstream 13027 true scaffold_9: 41271261-41284287 Theobroma cacao
Thecc1EG042153 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 41271261-41281260 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836741 5264 Brassicales-Malvales View MSA
124339528 5266 SBM View MSA
124254055 5268 Malvidae View MSA
124063526 5270 Rosid View MSA
123741698 5271 Pentapetalae View MSA
122788923 5272 Eudicot View MSA
122042963 5273 Angiosperm View MSA
121350379 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain