Gene : Thecc1EG042117 T. cacao v1.1
Defline:  (1 of 1) K03857 - phosphatidylinositol glycan, class A (PIGA, GPI3) Genomic Order:  3398
Name:  ? Thecc1EG042117 Secondary Identifier:  ? PAC:27428020
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042117 0.5kb upstream 0.5kb upstream 9377 true scaffold_9: 41090530-41099906 Theobroma cacao
Thecc1EG042117 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 41099407-41099906 Theobroma cacao
Thecc1EG042117 0.5kb downstream 0.5kb downstream 9377 true scaffold_9: 41090030-41099406 Theobroma cacao
Thecc1EG042117 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 41090030-41090529 Theobroma cacao
Thecc1EG042117 1.0kb upstream 1.0kb upstream 9877 true scaffold_9: 41090530-41100406 Theobroma cacao
Thecc1EG042117 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 41099407-41100406 Theobroma cacao
Thecc1EG042117 1.0kb downstream 1.0kb downstream 9877 true scaffold_9: 41089530-41099406 Theobroma cacao
Thecc1EG042117 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 41089530-41090529 Theobroma cacao
Thecc1EG042117 2.0kb upstream 2.0kb upstream 10877 true scaffold_9: 41090530-41101406 Theobroma cacao
Thecc1EG042117 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 41099407-41101406 Theobroma cacao
Thecc1EG042117 2.0kb downstream 2.0kb downstream 10877 true scaffold_9: 41088530-41099406 Theobroma cacao
Thecc1EG042117 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 41088530-41090529 Theobroma cacao
Thecc1EG042117 5.0kb upstream 5.0kb upstream 13877 true scaffold_9: 41090530-41104406 Theobroma cacao
Thecc1EG042117 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 41099407-41104406 Theobroma cacao
Thecc1EG042117 5.0kb downstream 5.0kb downstream 13877 true scaffold_9: 41085530-41099406 Theobroma cacao
Thecc1EG042117 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 41085530-41090529 Theobroma cacao
Thecc1EG042117 10.0kb upstream 10.0kb upstream 18877 true scaffold_9: 41090530-41109406 Theobroma cacao
Thecc1EG042117 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 41099407-41109406 Theobroma cacao
Thecc1EG042117 10.0kb downstream 10.0kb downstream 18877 true scaffold_9: 41080530-41099406 Theobroma cacao
Thecc1EG042117 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 41080530-41090529 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831035 5264 Brassicales-Malvales View MSA
124336616 5266 SBM View MSA
124237423 5268 Malvidae View MSA
124063520 5270 Rosid View MSA
123741012 5271 Pentapetalae View MSA
122789718 5272 Eudicot View MSA
122046475 5273 Angiosperm View MSA
123429006 5275 Viridiplantae View MSA
121346219 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain