Gene : Thecc1EG042050 T. cacao v1.1

Defline:  Uncharacterized protein (65%P) Genomic Order:  3344
Name:  ? Thecc1EG042050 Secondary Identifier:  ? PAC:27430894

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042050 0.5kb upstream 0.5kb upstream 2423 true scaffold_9: 40761084-40763506 Theobroma cacao
Thecc1EG042050 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40761084-40761583 Theobroma cacao
Thecc1EG042050 0.5kb downstream 0.5kb downstream 2423 true scaffold_9: 40761584-40764006 Theobroma cacao
Thecc1EG042050 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40763507-40764006 Theobroma cacao
Thecc1EG042050 1.0kb upstream 1.0kb upstream 2923 true scaffold_9: 40760584-40763506 Theobroma cacao
Thecc1EG042050 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40760584-40761583 Theobroma cacao
Thecc1EG042050 1.0kb downstream 1.0kb downstream 2923 true scaffold_9: 40761584-40764506 Theobroma cacao
Thecc1EG042050 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40763507-40764506 Theobroma cacao
Thecc1EG042050 2.0kb upstream 2.0kb upstream 3923 true scaffold_9: 40759584-40763506 Theobroma cacao
Thecc1EG042050 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40759584-40761583 Theobroma cacao
Thecc1EG042050 2.0kb downstream 2.0kb downstream 3923 true scaffold_9: 40761584-40765506 Theobroma cacao
Thecc1EG042050 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40763507-40765506 Theobroma cacao
Thecc1EG042050 5.0kb upstream 5.0kb upstream 6923 true scaffold_9: 40756584-40763506 Theobroma cacao
Thecc1EG042050 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40756584-40761583 Theobroma cacao
Thecc1EG042050 5.0kb downstream 5.0kb downstream 6923 true scaffold_9: 40761584-40768506 Theobroma cacao
Thecc1EG042050 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40763507-40768506 Theobroma cacao
Thecc1EG042050 10.0kb upstream 10.0kb upstream 11923 true scaffold_9: 40751584-40763506 Theobroma cacao
Thecc1EG042050 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40751584-40761583 Theobroma cacao
Thecc1EG042050 10.0kb downstream 10.0kb downstream 11923 true scaffold_9: 40761584-40773506 Theobroma cacao
Thecc1EG042050 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40763507-40773506 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027321 5273 Angiosperm View MSA
124068008 5270 Rosid View MSA
123827827 5264 Brassicales-Malvales View MSA
124337400 5266 SBM View MSA
124254622 5268 Malvidae View MSA
123745118 5271 Pentapetalae View MSA
122793231 5272 Eudicot View MSA
121348410 5274 Embryophyte View MSA
123427481 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain