Gene : Thecc1EG042221 T. cacao v1.1

Defline:  (1 of 1) PTHR12320//PTHR12320:SF7 - PROTEIN PHOSPHATASE 2C // PROTEIN PHOSPHATASE 2C 26-RELATED Genomic Order:  3499
Name:  ? Thecc1EG042221 Secondary Identifier:  ? PAC:27429151

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042221 0.5kb upstream 0.5kb upstream 2878 true scaffold_9: 41570210-41573087 Theobroma cacao
Thecc1EG042221 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 41572588-41573087 Theobroma cacao
Thecc1EG042221 0.5kb downstream 0.5kb downstream 2878 true scaffold_9: 41569710-41572587 Theobroma cacao
Thecc1EG042221 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 41569710-41570209 Theobroma cacao
Thecc1EG042221 1.0kb upstream 1.0kb upstream 3378 true scaffold_9: 41570210-41573587 Theobroma cacao
Thecc1EG042221 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 41572588-41573587 Theobroma cacao
Thecc1EG042221 1.0kb downstream 1.0kb downstream 3378 true scaffold_9: 41569210-41572587 Theobroma cacao
Thecc1EG042221 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 41569210-41570209 Theobroma cacao
Thecc1EG042221 2.0kb upstream 2.0kb upstream 4378 true scaffold_9: 41570210-41574587 Theobroma cacao
Thecc1EG042221 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 41572588-41574587 Theobroma cacao
Thecc1EG042221 2.0kb downstream 2.0kb downstream 4378 true scaffold_9: 41568210-41572587 Theobroma cacao
Thecc1EG042221 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 41568210-41570209 Theobroma cacao
Thecc1EG042221 5.0kb upstream 5.0kb upstream 7378 true scaffold_9: 41570210-41577587 Theobroma cacao
Thecc1EG042221 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 41572588-41577587 Theobroma cacao
Thecc1EG042221 5.0kb downstream 5.0kb downstream 7378 true scaffold_9: 41565210-41572587 Theobroma cacao
Thecc1EG042221 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 41565210-41570209 Theobroma cacao
Thecc1EG042221 10.0kb upstream 10.0kb upstream 12378 true scaffold_9: 41570210-41582587 Theobroma cacao
Thecc1EG042221 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 41572588-41582587 Theobroma cacao
Thecc1EG042221 10.0kb downstream 10.0kb downstream 12378 true scaffold_9: 41560210-41572587 Theobroma cacao
Thecc1EG042221 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 41560210-41570209 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829273 5264 Brassicales-Malvales View MSA
124346579 5266 SBM View MSA
124237499 5268 Malvidae View MSA
124067424 5270 Rosid View MSA
123737907 5271 Pentapetalae View MSA
122786654 5272 Eudicot View MSA
122044601 5273 Angiosperm View MSA
121346475 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain