Gene : 29822.t000163 R. communis v0.1
Defline:  (1 of 1) PTHR11946:SF53 - TYROSINE-TRNA LIGASE Genomic Order:  162
Name:  ? 29822.t000163 Secondary Identifier:  ? PAC:16809857
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis TRNA-CHARGING-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29822.t000163 0.5kb upstream 0.5kb upstream 4023 true 29822: 936000-940022 Ricinus communis
29822.t000163 0.5kb upstream 0.5kb upstream 500 false 29822: 936000-936499 Ricinus communis
29822.t000163 0.5kb downstream 0.5kb downstream 4023 true 29822: 936500-940522 Ricinus communis
29822.t000163 0.5kb downstream 0.5kb downstream 500 false 29822: 940023-940522 Ricinus communis
29822.t000163 1.0kb upstream 1.0kb upstream 4523 true 29822: 935500-940022 Ricinus communis
29822.t000163 1.0kb upstream 1.0kb upstream 1000 false 29822: 935500-936499 Ricinus communis
29822.t000163 1.0kb downstream 1.0kb downstream 4523 true 29822: 936500-941022 Ricinus communis
29822.t000163 1.0kb downstream 1.0kb downstream 1000 false 29822: 940023-941022 Ricinus communis
29822.t000163 2.0kb upstream 2.0kb upstream 5523 true 29822: 934500-940022 Ricinus communis
29822.t000163 2.0kb upstream 2.0kb upstream 2000 false 29822: 934500-936499 Ricinus communis
29822.t000163 2.0kb downstream 2.0kb downstream 5523 true 29822: 936500-942022 Ricinus communis
29822.t000163 2.0kb downstream 2.0kb downstream 2000 false 29822: 940023-942022 Ricinus communis
29822.t000163 5.0kb upstream 5.0kb upstream 8523 true 29822: 931500-940022 Ricinus communis
29822.t000163 5.0kb upstream 5.0kb upstream 5000 false 29822: 931500-936499 Ricinus communis
29822.t000163 5.0kb downstream 5.0kb downstream 8523 true 29822: 936500-945022 Ricinus communis
29822.t000163 5.0kb downstream 5.0kb downstream 5000 false 29822: 940023-945022 Ricinus communis
29822.t000163 10.0kb upstream 10.0kb upstream 13523 true 29822: 926500-940022 Ricinus communis
29822.t000163 10.0kb upstream 10.0kb upstream 10000 false 29822: 926500-936499 Ricinus communis
29822.t000163 10.0kb downstream 10.0kb downstream 13523 true 29822: 936500-950022 Ricinus communis
29822.t000163 10.0kb downstream 10.0kb downstream 10000 false 29822: 940023-950022 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041140 5273 Angiosperm View MSA
122454923 5262 Malpighiales View MSA
124239628 5268 Malvidae View MSA
124067853 5270 Rosid View MSA
123747436 5271 Pentapetalae View MSA
122790144 5272 Eudicot View MSA
121344192 5274 Embryophyte View MSA
123424631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain