Gene : Sobic.008G111600 S. bicolor v3.1.1
Defline:  (1 of 3) K09487 - heat shock protein 90kDa beta (HSP90B, TRA1) Genomic Order:  1182
Name:  ? Sobic.008G111600 Secondary Identifier:  ? PAC:37928304
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G111600 0.5kb upstream 0.5kb upstream 8252   true Chr08: 51719209-51727460 Sorghum bicolor
Sobic.008G111600 0.5kb upstream 0.5kb upstream 500   false Chr08: 51726961-51727460 Sorghum bicolor
Sobic.008G111600 0.5kb downstream 0.5kb downstream 8252   true Chr08: 51718709-51726960 Sorghum bicolor
Sobic.008G111600 0.5kb downstream 0.5kb downstream 500   false Chr08: 51718709-51719208 Sorghum bicolor
Sobic.008G111600 1.0kb upstream 1.0kb upstream 8752   true Chr08: 51719209-51727960 Sorghum bicolor
Sobic.008G111600 1.0kb upstream 1.0kb upstream 1000   false Chr08: 51726961-51727960 Sorghum bicolor
Sobic.008G111600 1.0kb downstream 1.0kb downstream 8752   true Chr08: 51718209-51726960 Sorghum bicolor
Sobic.008G111600 1.0kb downstream 1.0kb downstream 1000   false Chr08: 51718209-51719208 Sorghum bicolor
Sobic.008G111600 2.0kb upstream 2.0kb upstream 9752   true Chr08: 51719209-51728960 Sorghum bicolor
Sobic.008G111600 2.0kb upstream 2.0kb upstream 2000   false Chr08: 51726961-51728960 Sorghum bicolor
Sobic.008G111600 2.0kb downstream 2.0kb downstream 9752   true Chr08: 51717209-51726960 Sorghum bicolor
Sobic.008G111600 2.0kb downstream 2.0kb downstream 2000   false Chr08: 51717209-51719208 Sorghum bicolor
Sobic.008G111600 5.0kb upstream 5.0kb upstream 12752   true Chr08: 51719209-51731960 Sorghum bicolor
Sobic.008G111600 5.0kb upstream 5.0kb upstream 5000   false Chr08: 51726961-51731960 Sorghum bicolor
Sobic.008G111600 5.0kb downstream 5.0kb downstream 12752   true Chr08: 51714209-51726960 Sorghum bicolor
Sobic.008G111600 5.0kb downstream 5.0kb downstream 5000   false Chr08: 51714209-51719208 Sorghum bicolor
Sobic.008G111600 10.0kb upstream 10.0kb upstream 17752   true Chr08: 51719209-51736960 Sorghum bicolor
Sobic.008G111600 10.0kb upstream 10.0kb upstream 10000   false Chr08: 51726961-51736960 Sorghum bicolor
Sobic.008G111600 10.0kb downstream 10.0kb downstream 17752   true Chr08: 51709209-51726960 Sorghum bicolor
Sobic.008G111600 10.0kb downstream 10.0kb downstream 10000   false Chr08: 51709209-51719208 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177454 5267 Panicoideae View MSA
124574402 5269 Grass View MSA
122044795 5273 Angiosperm View MSA
121310342 5274 Embryophyte View MSA
123428204 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.012        
cufflinks 0.409       Low
cufflinks 1.804       Low
cufflinks 5.022        
cufflinks 13.049     High  
cufflinks 2.627        
cufflinks 5.833        
cufflinks 0.929       Low
cufflinks 14.134     High  
cufflinks 16.335     High  
cufflinks 12.986     High  
cufflinks 10.342        
cufflinks 5.189        
cufflinks 10.169        
cufflinks 8.298        
cufflinks 1.317       Low
cufflinks 6.2        
cufflinks 6.918        
cufflinks 1.034       Low
cufflinks 5.711        
cufflinks 26.044     High High
cufflinks 15.085     High  
cufflinks 14.635     High  
cufflinks 15.883     High  
cufflinks 0.916       Low
cufflinks 0.407       Low
cufflinks 7.897        
cufflinks 10.187     High  
cufflinks 3.118        
cufflinks 15.463     High  

0 Strain