Gene : Sobic.008G112500 S. bicolor v3.1.1
Defline:  (1 of 3) PF00023 - Ankyrin repeat (Ank) Genomic Order:  1190
Name:  ? Sobic.008G112500 Secondary Identifier:  ? PAC:37928621
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G112500 0.5kb upstream 0.5kb upstream 2373   true Chr08: 52002559-52004931 Sorghum bicolor
Sobic.008G112500 0.5kb upstream 0.5kb upstream 500   false Chr08: 52002559-52003058 Sorghum bicolor
Sobic.008G112500 0.5kb downstream 0.5kb downstream 2373   true Chr08: 52003059-52005431 Sorghum bicolor
Sobic.008G112500 0.5kb downstream 0.5kb downstream 500   false Chr08: 52004932-52005431 Sorghum bicolor
Sobic.008G112500 1.0kb upstream 1.0kb upstream 2873   true Chr08: 52002059-52004931 Sorghum bicolor
Sobic.008G112500 1.0kb upstream 1.0kb upstream 1000   false Chr08: 52002059-52003058 Sorghum bicolor
Sobic.008G112500 1.0kb downstream 1.0kb downstream 2873   true Chr08: 52003059-52005931 Sorghum bicolor
Sobic.008G112500 1.0kb downstream 1.0kb downstream 1000   false Chr08: 52004932-52005931 Sorghum bicolor
Sobic.008G112500 2.0kb upstream 2.0kb upstream 3873   true Chr08: 52001059-52004931 Sorghum bicolor
Sobic.008G112500 2.0kb upstream 2.0kb upstream 2000   false Chr08: 52001059-52003058 Sorghum bicolor
Sobic.008G112500 2.0kb downstream 2.0kb downstream 3873   true Chr08: 52003059-52006931 Sorghum bicolor
Sobic.008G112500 2.0kb downstream 2.0kb downstream 2000   false Chr08: 52004932-52006931 Sorghum bicolor
Sobic.008G112500 5.0kb upstream 5.0kb upstream 6873   true Chr08: 51998059-52004931 Sorghum bicolor
Sobic.008G112500 5.0kb upstream 5.0kb upstream 5000   false Chr08: 51998059-52003058 Sorghum bicolor
Sobic.008G112500 5.0kb downstream 5.0kb downstream 6873   true Chr08: 52003059-52009931 Sorghum bicolor
Sobic.008G112500 5.0kb downstream 5.0kb downstream 5000   false Chr08: 52004932-52009931 Sorghum bicolor
Sobic.008G112500 10.0kb upstream 10.0kb upstream 11873   true Chr08: 51993059-52004931 Sorghum bicolor
Sobic.008G112500 10.0kb upstream 10.0kb upstream 10000   false Chr08: 51993059-52003058 Sorghum bicolor
Sobic.008G112500 10.0kb downstream 10.0kb downstream 11873   true Chr08: 52003059-52014931 Sorghum bicolor
Sobic.008G112500 10.0kb downstream 10.0kb downstream 10000   false Chr08: 52004932-52014931 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027558 5273 Angiosperm View MSA
122185654 5267 Panicoideae View MSA
124570393 5269 Grass View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.519        
cufflinks 0.722       Low
cufflinks 0.39       Low
cufflinks 1.554        
cufflinks 2.377        
cufflinks 2.253        
cufflinks 1.803        
cufflinks 0.664       Low
cufflinks 3.63       High
cufflinks 3.668       High
cufflinks 1.583        
cufflinks 5.296       High
cufflinks 2.144        
cufflinks 3.517       High
cufflinks 2.201        
cufflinks 1.222        
cufflinks 1.725        
cufflinks 1.255        
cufflinks 0.649       Low
cufflinks 2.823        
cufflinks 6.083       High
cufflinks 1.991        
cufflinks 3.094        
cufflinks 3.038        
cufflinks 0.777       Low
cufflinks 0.482       Low
cufflinks 0.818       Low
cufflinks 1.667        
cufflinks 0.627       Low
cufflinks 2.235        

0 Strain