Gene : Sobic.008G114900 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR23177//PTHR23177:SF17 - MKIAA1688 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1216
Name:  ? Sobic.008G114900 Secondary Identifier:  ? PAC:37927907
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G114900 0.5kb upstream 0.5kb upstream 3324   true Chr08: 52386351-52389674 Sorghum bicolor
Sobic.008G114900 0.5kb upstream 0.5kb upstream 500   false Chr08: 52386351-52386850 Sorghum bicolor
Sobic.008G114900 0.5kb downstream 0.5kb downstream 3324   true Chr08: 52386851-52390174 Sorghum bicolor
Sobic.008G114900 0.5kb downstream 0.5kb downstream 500   false Chr08: 52389675-52390174 Sorghum bicolor
Sobic.008G114900 1.0kb upstream 1.0kb upstream 3824   true Chr08: 52385851-52389674 Sorghum bicolor
Sobic.008G114900 1.0kb upstream 1.0kb upstream 1000   false Chr08: 52385851-52386850 Sorghum bicolor
Sobic.008G114900 1.0kb downstream 1.0kb downstream 3824   true Chr08: 52386851-52390674 Sorghum bicolor
Sobic.008G114900 1.0kb downstream 1.0kb downstream 1000   false Chr08: 52389675-52390674 Sorghum bicolor
Sobic.008G114900 2.0kb upstream 2.0kb upstream 4824   true Chr08: 52384851-52389674 Sorghum bicolor
Sobic.008G114900 2.0kb upstream 2.0kb upstream 2000   false Chr08: 52384851-52386850 Sorghum bicolor
Sobic.008G114900 2.0kb downstream 2.0kb downstream 4824   true Chr08: 52386851-52391674 Sorghum bicolor
Sobic.008G114900 2.0kb downstream 2.0kb downstream 2000   false Chr08: 52389675-52391674 Sorghum bicolor
Sobic.008G114900 5.0kb upstream 5.0kb upstream 7824   true Chr08: 52381851-52389674 Sorghum bicolor
Sobic.008G114900 5.0kb upstream 5.0kb upstream 5000   false Chr08: 52381851-52386850 Sorghum bicolor
Sobic.008G114900 5.0kb downstream 5.0kb downstream 7824   true Chr08: 52386851-52394674 Sorghum bicolor
Sobic.008G114900 5.0kb downstream 5.0kb downstream 5000   false Chr08: 52389675-52394674 Sorghum bicolor
Sobic.008G114900 10.0kb upstream 10.0kb upstream 12824   true Chr08: 52376851-52389674 Sorghum bicolor
Sobic.008G114900 10.0kb upstream 10.0kb upstream 10000   false Chr08: 52376851-52386850 Sorghum bicolor
Sobic.008G114900 10.0kb downstream 10.0kb downstream 12824   true Chr08: 52386851-52399674 Sorghum bicolor
Sobic.008G114900 10.0kb downstream 10.0kb downstream 10000   false Chr08: 52389675-52399674 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180879 5267 Panicoideae View MSA
124569597 5269 Grass View MSA
122046059 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.49        
cufflinks 0.102       Low
cufflinks 0.057     Low Low
cufflinks 0.058     Low Low
cufflinks 3.858        
cufflinks 0.315        
cufflinks 5.423       High
cufflinks 0.31        
cufflinks 0.13       Low
cufflinks 0.61        
cufflinks 2.627        
cufflinks 1.838        
cufflinks 0.264        
cufflinks 2.728        
cufflinks 2.677        
cufflinks 0.061     Low Low
cufflinks 5.708       High
cufflinks 6.058       High
cufflinks 0.124       Low
cufflinks 3.928        
cufflinks 30.138     High High
cufflinks 2.511        
cufflinks 2.734        
cufflinks 3.216        
cufflinks 0.031     Low Low
cufflinks 0.033     Low Low
cufflinks 0.591        
cufflinks 0.224        
cufflinks 0.476        
cufflinks 3.688        

0 Strain