Gene : Sobic.010G085600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11071//PTHR11071:SF279 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Genomic Order:  883
Name:  ? Sobic.010G085600 Secondary Identifier:  ? PAC:37911739
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G085600 0.5kb upstream 0.5kb upstream 7199   true Chr10: 7347241-7354439 Sorghum bicolor
Sobic.010G085600 0.5kb upstream 0.5kb upstream 500   false Chr10: 7347241-7347740 Sorghum bicolor
Sobic.010G085600 0.5kb downstream 0.5kb downstream 7199   true Chr10: 7347741-7354939 Sorghum bicolor
Sobic.010G085600 0.5kb downstream 0.5kb downstream 500   false Chr10: 7354440-7354939 Sorghum bicolor
Sobic.010G085600 1.0kb upstream 1.0kb upstream 7699   true Chr10: 7346741-7354439 Sorghum bicolor
Sobic.010G085600 1.0kb upstream 1.0kb upstream 1000   false Chr10: 7346741-7347740 Sorghum bicolor
Sobic.010G085600 1.0kb downstream 1.0kb downstream 7699   true Chr10: 7347741-7355439 Sorghum bicolor
Sobic.010G085600 1.0kb downstream 1.0kb downstream 1000   false Chr10: 7354440-7355439 Sorghum bicolor
Sobic.010G085600 2.0kb upstream 2.0kb upstream 8699   true Chr10: 7345741-7354439 Sorghum bicolor
Sobic.010G085600 2.0kb upstream 2.0kb upstream 2000   false Chr10: 7345741-7347740 Sorghum bicolor
Sobic.010G085600 2.0kb downstream 2.0kb downstream 8699   true Chr10: 7347741-7356439 Sorghum bicolor
Sobic.010G085600 2.0kb downstream 2.0kb downstream 2000   false Chr10: 7354440-7356439 Sorghum bicolor
Sobic.010G085600 5.0kb upstream 5.0kb upstream 11699   true Chr10: 7342741-7354439 Sorghum bicolor
Sobic.010G085600 5.0kb upstream 5.0kb upstream 5000   false Chr10: 7342741-7347740 Sorghum bicolor
Sobic.010G085600 5.0kb downstream 5.0kb downstream 11699   true Chr10: 7347741-7359439 Sorghum bicolor
Sobic.010G085600 5.0kb downstream 5.0kb downstream 5000   false Chr10: 7354440-7359439 Sorghum bicolor
Sobic.010G085600 10.0kb upstream 10.0kb upstream 16699   true Chr10: 7337741-7354439 Sorghum bicolor
Sobic.010G085600 10.0kb upstream 10.0kb upstream 10000   false Chr10: 7337741-7347740 Sorghum bicolor
Sobic.010G085600 10.0kb downstream 10.0kb downstream 16699   true Chr10: 7347741-7364439 Sorghum bicolor
Sobic.010G085600 10.0kb downstream 10.0kb downstream 10000   false Chr10: 7354440-7364439 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180528 5267 Panicoideae View MSA
124574078 5269 Grass View MSA
122048372 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121348447 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.396       High
cufflinks 0.21       Low
cufflinks 0.509        
cufflinks 2.863       High
cufflinks 0.418       Low
cufflinks 0.993        
cufflinks 1.127        
cufflinks 0.347       Low
cufflinks 2.291       High
cufflinks 2.907       High
cufflinks 2.033        
cufflinks 1.648        
cufflinks 0.988        
cufflinks 1.453        
cufflinks 0.85        
cufflinks 0.294       Low
cufflinks 1.459        
cufflinks 1.121        
cufflinks 0.317       Low
cufflinks 0.884        
cufflinks 0.586        
cufflinks 2.351       High
cufflinks 2.281       High
cufflinks 2.207       High
cufflinks 0.29       Low
cufflinks 0.139       Low
cufflinks 1.742        
cufflinks 2.126        
cufflinks 0.62        
cufflinks 1.809        

0 Strain