Gene : Sobic.008G129100 S. bicolor v3.1.1
Defline:  similar to Expressed protein Genomic Order:  1356
Name:  ? Sobic.008G129100 Secondary Identifier:  ? PAC:37927433
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G129100 0.5kb upstream 0.5kb upstream 3035   true Chr08: 55509364-55512398 Sorghum bicolor
Sobic.008G129100 0.5kb upstream 0.5kb upstream 500   false Chr08: 55509364-55509863 Sorghum bicolor
Sobic.008G129100 0.5kb downstream 0.5kb downstream 3035   true Chr08: 55509864-55512898 Sorghum bicolor
Sobic.008G129100 0.5kb downstream 0.5kb downstream 500   false Chr08: 55512399-55512898 Sorghum bicolor
Sobic.008G129100 1.0kb upstream 1.0kb upstream 3535   true Chr08: 55508864-55512398 Sorghum bicolor
Sobic.008G129100 1.0kb upstream 1.0kb upstream 1000   false Chr08: 55508864-55509863 Sorghum bicolor
Sobic.008G129100 1.0kb downstream 1.0kb downstream 3535   true Chr08: 55509864-55513398 Sorghum bicolor
Sobic.008G129100 1.0kb downstream 1.0kb downstream 1000   false Chr08: 55512399-55513398 Sorghum bicolor
Sobic.008G129100 2.0kb upstream 2.0kb upstream 4535   true Chr08: 55507864-55512398 Sorghum bicolor
Sobic.008G129100 2.0kb upstream 2.0kb upstream 2000   false Chr08: 55507864-55509863 Sorghum bicolor
Sobic.008G129100 2.0kb downstream 2.0kb downstream 4535   true Chr08: 55509864-55514398 Sorghum bicolor
Sobic.008G129100 2.0kb downstream 2.0kb downstream 2000   false Chr08: 55512399-55514398 Sorghum bicolor
Sobic.008G129100 5.0kb upstream 5.0kb upstream 7535   true Chr08: 55504864-55512398 Sorghum bicolor
Sobic.008G129100 5.0kb upstream 5.0kb upstream 5000   false Chr08: 55504864-55509863 Sorghum bicolor
Sobic.008G129100 5.0kb downstream 5.0kb downstream 7535   true Chr08: 55509864-55517398 Sorghum bicolor
Sobic.008G129100 5.0kb downstream 5.0kb downstream 5000   false Chr08: 55512399-55517398 Sorghum bicolor
Sobic.008G129100 10.0kb upstream 10.0kb upstream 12535   true Chr08: 55499864-55512398 Sorghum bicolor
Sobic.008G129100 10.0kb upstream 10.0kb upstream 10000   false Chr08: 55499864-55509863 Sorghum bicolor
Sobic.008G129100 10.0kb downstream 10.0kb downstream 12535   true Chr08: 55509864-55522398 Sorghum bicolor
Sobic.008G129100 10.0kb downstream 10.0kb downstream 10000   false Chr08: 55512399-55522398 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122146255 5267 Panicoideae Singleton cluster - no MSA
124585729 5269 Grass View MSA
122046334 5273 Angiosperm View MSA
121346218 5274 Embryophyte View MSA
123427523 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.541       Low
cufflinks 2.952       Low
cufflinks 8.475        
cufflinks 14.008     High High
cufflinks 9.527        
cufflinks 14.149     High High
cufflinks 5.715        
cufflinks 3.203       Low
cufflinks 14.003     High High
cufflinks 10.86       High
cufflinks 5.33        
cufflinks 6.968        
cufflinks 8.812        
cufflinks 6.191        
cufflinks 7.577        
cufflinks 8.033        
cufflinks 5.703        
cufflinks 5.993        
cufflinks 6.091        
cufflinks 7.486        
cufflinks 8.1        
cufflinks 6.39        
cufflinks 5.925        
cufflinks 5.478        
cufflinks 5.466        
cufflinks 2.131       Low
cufflinks 9.151        
cufflinks 4.463        
cufflinks 4.587        
cufflinks 8.868        

0 Strain