Gene : Sobic.010G074700 S. bicolor v3.1.1
Defline:  (1 of 5) 4.1.1.36 - Phosphopantothenoylcysteine decarboxylase / N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase Genomic Order:  764
Name:  ? Sobic.010G074700 Secondary Identifier:  ? PAC:37911113
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor COA-PWY Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G074700 0.5kb upstream 0.5kb upstream 2589   true Chr10: 6081819-6084407 Sorghum bicolor
Sobic.010G074700 0.5kb upstream 0.5kb upstream 500   false Chr10: 6083908-6084407 Sorghum bicolor
Sobic.010G074700 0.5kb downstream 0.5kb downstream 2589   true Chr10: 6081319-6083907 Sorghum bicolor
Sobic.010G074700 0.5kb downstream 0.5kb downstream 500   false Chr10: 6081319-6081818 Sorghum bicolor
Sobic.010G074700 1.0kb upstream 1.0kb upstream 3089   true Chr10: 6081819-6084907 Sorghum bicolor
Sobic.010G074700 1.0kb upstream 1.0kb upstream 1000   false Chr10: 6083908-6084907 Sorghum bicolor
Sobic.010G074700 1.0kb downstream 1.0kb downstream 3089   true Chr10: 6080819-6083907 Sorghum bicolor
Sobic.010G074700 1.0kb downstream 1.0kb downstream 1000   false Chr10: 6080819-6081818 Sorghum bicolor
Sobic.010G074700 2.0kb upstream 2.0kb upstream 4089   true Chr10: 6081819-6085907 Sorghum bicolor
Sobic.010G074700 2.0kb upstream 2.0kb upstream 2000   false Chr10: 6083908-6085907 Sorghum bicolor
Sobic.010G074700 2.0kb downstream 2.0kb downstream 4089   true Chr10: 6079819-6083907 Sorghum bicolor
Sobic.010G074700 2.0kb downstream 2.0kb downstream 2000   false Chr10: 6079819-6081818 Sorghum bicolor
Sobic.010G074700 5.0kb upstream 5.0kb upstream 7089   true Chr10: 6081819-6088907 Sorghum bicolor
Sobic.010G074700 5.0kb upstream 5.0kb upstream 5000   false Chr10: 6083908-6088907 Sorghum bicolor
Sobic.010G074700 5.0kb downstream 5.0kb downstream 7089   true Chr10: 6076819-6083907 Sorghum bicolor
Sobic.010G074700 5.0kb downstream 5.0kb downstream 5000   false Chr10: 6076819-6081818 Sorghum bicolor
Sobic.010G074700 10.0kb upstream 10.0kb upstream 12089   true Chr10: 6081819-6093907 Sorghum bicolor
Sobic.010G074700 10.0kb upstream 10.0kb upstream 10000   false Chr10: 6083908-6093907 Sorghum bicolor
Sobic.010G074700 10.0kb downstream 10.0kb downstream 12089   true Chr10: 6071819-6083907 Sorghum bicolor
Sobic.010G074700 10.0kb downstream 10.0kb downstream 10000   false Chr10: 6071819-6081818 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122201078 5267 Panicoideae View MSA
124582681 5269 Grass View MSA
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.953        
cufflinks 0.271       Low
cufflinks 0.304       Low
cufflinks 0.306       Low
cufflinks 1.475        
cufflinks 1.47        
cufflinks 0.925        
cufflinks 0.834        
cufflinks 0.926        
cufflinks 1.023        
cufflinks 0.373        
cufflinks 0.357        
cufflinks 2.495       High
cufflinks 0.341        
cufflinks 2.06       High
cufflinks 0.274       Low
cufflinks 0.94        
cufflinks 0.984        
cufflinks 0.393        
cufflinks 1.033        
cufflinks 3.567       High
cufflinks 0.296       Low
cufflinks 0.268       Low
cufflinks 0.323        
cufflinks 0.394        
cufflinks 0.222       Low
cufflinks 0.6        
cufflinks 0.065     Low Low
cufflinks 1.457        
cufflinks 1.638       High

0 Strain