Gene : Sobic.010G116800 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11390:SF27 - DNA TOPOISOMERASE Genomic Order:  1223
Name:  ? Sobic.010G116800 Secondary Identifier:  ? PAC:37912417
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G116800 0.5kb upstream 0.5kb upstream 6095   true Chr10: 12802389-12808483 Sorghum bicolor
Sobic.010G116800 0.5kb upstream 0.5kb upstream 500   false Chr10: 12807984-12808483 Sorghum bicolor
Sobic.010G116800 0.5kb downstream 0.5kb downstream 6095   true Chr10: 12801889-12807983 Sorghum bicolor
Sobic.010G116800 0.5kb downstream 0.5kb downstream 500   false Chr10: 12801889-12802388 Sorghum bicolor
Sobic.010G116800 1.0kb upstream 1.0kb upstream 6595   true Chr10: 12802389-12808983 Sorghum bicolor
Sobic.010G116800 1.0kb upstream 1.0kb upstream 1000   false Chr10: 12807984-12808983 Sorghum bicolor
Sobic.010G116800 1.0kb downstream 1.0kb downstream 6595   true Chr10: 12801389-12807983 Sorghum bicolor
Sobic.010G116800 1.0kb downstream 1.0kb downstream 1000   false Chr10: 12801389-12802388 Sorghum bicolor
Sobic.010G116800 2.0kb upstream 2.0kb upstream 7595   true Chr10: 12802389-12809983 Sorghum bicolor
Sobic.010G116800 2.0kb upstream 2.0kb upstream 2000   false Chr10: 12807984-12809983 Sorghum bicolor
Sobic.010G116800 2.0kb downstream 2.0kb downstream 7595   true Chr10: 12800389-12807983 Sorghum bicolor
Sobic.010G116800 2.0kb downstream 2.0kb downstream 2000   false Chr10: 12800389-12802388 Sorghum bicolor
Sobic.010G116800 5.0kb upstream 5.0kb upstream 10595   true Chr10: 12802389-12812983 Sorghum bicolor
Sobic.010G116800 5.0kb upstream 5.0kb upstream 5000   false Chr10: 12807984-12812983 Sorghum bicolor
Sobic.010G116800 5.0kb downstream 5.0kb downstream 10595   true Chr10: 12797389-12807983 Sorghum bicolor
Sobic.010G116800 5.0kb downstream 5.0kb downstream 5000   false Chr10: 12797389-12802388 Sorghum bicolor
Sobic.010G116800 10.0kb upstream 10.0kb upstream 15595   true Chr10: 12802389-12817983 Sorghum bicolor
Sobic.010G116800 10.0kb upstream 10.0kb upstream 10000   false Chr10: 12807984-12817983 Sorghum bicolor
Sobic.010G116800 10.0kb downstream 10.0kb downstream 15595   true Chr10: 12792389-12807983 Sorghum bicolor
Sobic.010G116800 10.0kb downstream 10.0kb downstream 10000   false Chr10: 12792389-12802388 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028131 5273 Angiosperm View MSA
122174672 5267 Panicoideae View MSA
124584842 5269 Grass View MSA
121297669 5274 Embryophyte View MSA
123335701 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.052     Low  
cufflinks 0.019     Low Low
cufflinks 0.041     Low Low
cufflinks 0.057     Low  
cufflinks 0.115        
cufflinks 0.064     Low  
cufflinks 0.099        
cufflinks 0.049     Low  
cufflinks 0.086        
cufflinks 0.078        
cufflinks 0.091        
cufflinks 0.067     Low  
cufflinks 0.065     Low  
cufflinks 0.081     Low  
cufflinks 0.079     Low  
cufflinks 0.042     Low Low
cufflinks 0.097     Low  
cufflinks 0.125       High
cufflinks 0.044     Low  
cufflinks 0.06     Low  
cufflinks 0.179       High
cufflinks 0.09     Low  
cufflinks 0.094     Low  
cufflinks 0.089     Low  
cufflinks 0.026     Low Low
cufflinks 0.02     Low Low
cufflinks 0.056     Low  
cufflinks 0.066     Low  
cufflinks 0.173       High
cufflinks 0.116       High

0 Strain