Gene : Sobic.010G115400 S. bicolor v3.1.1
Defline:  (1 of 164) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1206
Name:  ? Sobic.010G115400 Secondary Identifier:  ? PAC:37910452
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G115400 0.5kb upstream 0.5kb upstream 2467   true Chr10: 12325675-12328141 Sorghum bicolor
Sobic.010G115400 0.5kb upstream 0.5kb upstream 500   false Chr10: 12325675-12326174 Sorghum bicolor
Sobic.010G115400 0.5kb downstream 0.5kb downstream 2467   true Chr10: 12326175-12328641 Sorghum bicolor
Sobic.010G115400 0.5kb downstream 0.5kb downstream 500   false Chr10: 12328142-12328641 Sorghum bicolor
Sobic.010G115400 1.0kb upstream 1.0kb upstream 2967   true Chr10: 12325175-12328141 Sorghum bicolor
Sobic.010G115400 1.0kb upstream 1.0kb upstream 1000   false Chr10: 12325175-12326174 Sorghum bicolor
Sobic.010G115400 1.0kb downstream 1.0kb downstream 2967   true Chr10: 12326175-12329141 Sorghum bicolor
Sobic.010G115400 1.0kb downstream 1.0kb downstream 1000   false Chr10: 12328142-12329141 Sorghum bicolor
Sobic.010G115400 2.0kb upstream 2.0kb upstream 3967   true Chr10: 12324175-12328141 Sorghum bicolor
Sobic.010G115400 2.0kb upstream 2.0kb upstream 2000   false Chr10: 12324175-12326174 Sorghum bicolor
Sobic.010G115400 2.0kb downstream 2.0kb downstream 3967   true Chr10: 12326175-12330141 Sorghum bicolor
Sobic.010G115400 2.0kb downstream 2.0kb downstream 2000   false Chr10: 12328142-12330141 Sorghum bicolor
Sobic.010G115400 5.0kb upstream 5.0kb upstream 6967   true Chr10: 12321175-12328141 Sorghum bicolor
Sobic.010G115400 5.0kb upstream 5.0kb upstream 5000   false Chr10: 12321175-12326174 Sorghum bicolor
Sobic.010G115400 5.0kb downstream 5.0kb downstream 6967   true Chr10: 12326175-12333141 Sorghum bicolor
Sobic.010G115400 5.0kb downstream 5.0kb downstream 5000   false Chr10: 12328142-12333141 Sorghum bicolor
Sobic.010G115400 10.0kb upstream 10.0kb upstream 11967   true Chr10: 12316175-12328141 Sorghum bicolor
Sobic.010G115400 10.0kb upstream 10.0kb upstream 10000   false Chr10: 12316175-12326174 Sorghum bicolor
Sobic.010G115400 10.0kb downstream 10.0kb downstream 11967   true Chr10: 12326175-12338141 Sorghum bicolor
Sobic.010G115400 10.0kb downstream 10.0kb downstream 10000   false Chr10: 12328142-12338141 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196602 5267 Panicoideae View MSA
124585163 5269 Grass View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.534       Low
cufflinks 0.946        
cufflinks 2.494        
cufflinks 1.86        
cufflinks 4.826       High
cufflinks 0.822       Low
cufflinks 1.156        
cufflinks 1.002        
cufflinks 4.751       High
cufflinks 4.585       High
cufflinks 1.247        
cufflinks 2.617        
cufflinks 2.514        
cufflinks 1.576        
cufflinks 2.34        
cufflinks 1.399        
cufflinks 1.132        
cufflinks 1.074        
cufflinks 1.116        
cufflinks 1.596        
cufflinks 6.546       High
cufflinks 1.589        
cufflinks 1.441        
cufflinks 1.586        
cufflinks 1.539        
cufflinks 1.588        
cufflinks 2.203        
cufflinks 1.332        
cufflinks 0.956        
cufflinks 2.499        

0 Strain