Gene : Sobic.008G103700 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR33403:SF1 - PROTEIN SPIRAL1 Genomic Order:  1095
Name:  ? Sobic.008G103700 Secondary Identifier:  ? PAC:37928293
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G103700 0.5kb upstream 0.5kb upstream 2475   true Chr08: 49055490-49057964 Sorghum bicolor
Sobic.008G103700 0.5kb upstream 0.5kb upstream 500   false Chr08: 49057465-49057964 Sorghum bicolor
Sobic.008G103700 0.5kb downstream 0.5kb downstream 2475   true Chr08: 49054990-49057464 Sorghum bicolor
Sobic.008G103700 0.5kb downstream 0.5kb downstream 500   false Chr08: 49054990-49055489 Sorghum bicolor
Sobic.008G103700 1.0kb upstream 1.0kb upstream 2975   true Chr08: 49055490-49058464 Sorghum bicolor
Sobic.008G103700 1.0kb upstream 1.0kb upstream 1000   false Chr08: 49057465-49058464 Sorghum bicolor
Sobic.008G103700 1.0kb downstream 1.0kb downstream 2975   true Chr08: 49054490-49057464 Sorghum bicolor
Sobic.008G103700 1.0kb downstream 1.0kb downstream 1000   false Chr08: 49054490-49055489 Sorghum bicolor
Sobic.008G103700 2.0kb upstream 2.0kb upstream 3975   true Chr08: 49055490-49059464 Sorghum bicolor
Sobic.008G103700 2.0kb upstream 2.0kb upstream 2000   false Chr08: 49057465-49059464 Sorghum bicolor
Sobic.008G103700 2.0kb downstream 2.0kb downstream 3975   true Chr08: 49053490-49057464 Sorghum bicolor
Sobic.008G103700 2.0kb downstream 2.0kb downstream 2000   false Chr08: 49053490-49055489 Sorghum bicolor
Sobic.008G103700 5.0kb upstream 5.0kb upstream 6975   true Chr08: 49055490-49062464 Sorghum bicolor
Sobic.008G103700 5.0kb upstream 5.0kb upstream 5000   false Chr08: 49057465-49062464 Sorghum bicolor
Sobic.008G103700 5.0kb downstream 5.0kb downstream 6975   true Chr08: 49050490-49057464 Sorghum bicolor
Sobic.008G103700 5.0kb downstream 5.0kb downstream 5000   false Chr08: 49050490-49055489 Sorghum bicolor
Sobic.008G103700 10.0kb upstream 10.0kb upstream 11975   true Chr08: 49055490-49067464 Sorghum bicolor
Sobic.008G103700 10.0kb upstream 10.0kb upstream 10000   false Chr08: 49057465-49067464 Sorghum bicolor
Sobic.008G103700 10.0kb downstream 10.0kb downstream 11975   true Chr08: 49045490-49057464 Sorghum bicolor
Sobic.008G103700 10.0kb downstream 10.0kb downstream 10000   false Chr08: 49045490-49055489 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175206 5267 Panicoideae View MSA
124586243 5269 Grass View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 77.085     High Low
cufflinks 49.587     High Low
cufflinks 59.217     High Low
cufflinks 117.296     High  
cufflinks 129.406     High  
cufflinks 274.686     High  
cufflinks 187.067     High  
cufflinks 237.917     High  
cufflinks 147.366     High  
cufflinks 118.157     High  
cufflinks 143.761     High  
cufflinks 206.821     High  
cufflinks 388.195     High High
cufflinks 177.715     High  
cufflinks 145.647     High  
cufflinks 89.694     High  
cufflinks 224.298     High  
cufflinks 221.604     High  
cufflinks 117.431     High  
cufflinks 367.44     High High
cufflinks 103.747     High  
cufflinks 114.258     High  
cufflinks 187.209     High  
cufflinks 157.513     High  
cufflinks 72.86     High Low
cufflinks 51.785     High Low
cufflinks 201.871     High  
cufflinks 58.078     High Low
cufflinks 316.484     High High
cufflinks 118.052     High  

0 Strain