Gene : Sobic.008G146100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11909//PTHR11909:SF181 - CASEIN KINASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1537
Name:  ? Sobic.008G146100 Secondary Identifier:  ? PAC:37927554
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G146100 0.5kb upstream 0.5kb upstream 4883   true Chr08: 57806111-57810993 Sorghum bicolor
Sobic.008G146100 0.5kb upstream 0.5kb upstream 500   false Chr08: 57810494-57810993 Sorghum bicolor
Sobic.008G146100 0.5kb downstream 0.5kb downstream 4883   true Chr08: 57805611-57810493 Sorghum bicolor
Sobic.008G146100 0.5kb downstream 0.5kb downstream 500   false Chr08: 57805611-57806110 Sorghum bicolor
Sobic.008G146100 1.0kb upstream 1.0kb upstream 5383   true Chr08: 57806111-57811493 Sorghum bicolor
Sobic.008G146100 1.0kb upstream 1.0kb upstream 1000   false Chr08: 57810494-57811493 Sorghum bicolor
Sobic.008G146100 1.0kb downstream 1.0kb downstream 5383   true Chr08: 57805111-57810493 Sorghum bicolor
Sobic.008G146100 1.0kb downstream 1.0kb downstream 1000   false Chr08: 57805111-57806110 Sorghum bicolor
Sobic.008G146100 2.0kb upstream 2.0kb upstream 6383   true Chr08: 57806111-57812493 Sorghum bicolor
Sobic.008G146100 2.0kb upstream 2.0kb upstream 2000   false Chr08: 57810494-57812493 Sorghum bicolor
Sobic.008G146100 2.0kb downstream 2.0kb downstream 6383   true Chr08: 57804111-57810493 Sorghum bicolor
Sobic.008G146100 2.0kb downstream 2.0kb downstream 2000   false Chr08: 57804111-57806110 Sorghum bicolor
Sobic.008G146100 5.0kb upstream 5.0kb upstream 9383   true Chr08: 57806111-57815493 Sorghum bicolor
Sobic.008G146100 5.0kb upstream 5.0kb upstream 5000   false Chr08: 57810494-57815493 Sorghum bicolor
Sobic.008G146100 5.0kb downstream 5.0kb downstream 9383   true Chr08: 57801111-57810493 Sorghum bicolor
Sobic.008G146100 5.0kb downstream 5.0kb downstream 5000   false Chr08: 57801111-57806110 Sorghum bicolor
Sobic.008G146100 10.0kb upstream 10.0kb upstream 14383   true Chr08: 57806111-57820493 Sorghum bicolor
Sobic.008G146100 10.0kb upstream 10.0kb upstream 10000   false Chr08: 57810494-57820493 Sorghum bicolor
Sobic.008G146100 10.0kb downstream 10.0kb downstream 14383   true Chr08: 57796111-57810493 Sorghum bicolor
Sobic.008G146100 10.0kb downstream 10.0kb downstream 10000   false Chr08: 57796111-57806110 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195392 5267 Panicoideae View MSA
124572882 5269 Grass View MSA
122042474 5273 Angiosperm View MSA
121348190 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.081     Low  
cufflinks 0.016     Low  
cufflinks 0.587       High
cufflinks 0.737       High
cufflinks 0.032     Low  
cufflinks 0.032     Low  
cufflinks 0.065     Low  
cufflinks 0.015     Low  
cufflinks 0.056     Low  
cufflinks 0.049     Low  
cufflinks 0.014     Low  
cufflinks 0.023     Low  
cufflinks 0.05     Low  
cufflinks 0.029     Low  
cufflinks 0.068     Low  
cufflinks 0.134       High
cufflinks 0.056     Low  
cufflinks 0.077     Low  
cufflinks 0.056     Low  
cufflinks 0.088     Low  
cufflinks 0.378       High
cufflinks 0.032     Low  
cufflinks 0.026     Low  
cufflinks 0.041     Low  
cufflinks 0.009     Low Low
cufflinks 0.011     Low Low
cufflinks 0.021     Low  
cufflinks 0.021     Low  
cufflinks 0.005     Low Low
cufflinks 0.073     Low  

0 Strain