Gene : Sobic.010G191100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12565:SF112 - TRANSCRIPTION FACTOR BHLH48-RELATED Genomic Order:  2018
Name:  ? Sobic.010G191100 Secondary Identifier:  ? PAC:37910115
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G191100 0.5kb upstream 0.5kb upstream 8158   true Chr10: 53235608-53243765 Sorghum bicolor
Sobic.010G191100 0.5kb upstream 0.5kb upstream 500   false Chr10: 53243266-53243765 Sorghum bicolor
Sobic.010G191100 0.5kb downstream 0.5kb downstream 8158   true Chr10: 53235108-53243265 Sorghum bicolor
Sobic.010G191100 0.5kb downstream 0.5kb downstream 500   false Chr10: 53235108-53235607 Sorghum bicolor
Sobic.010G191100 1.0kb upstream 1.0kb upstream 8658   true Chr10: 53235608-53244265 Sorghum bicolor
Sobic.010G191100 1.0kb upstream 1.0kb upstream 1000   false Chr10: 53243266-53244265 Sorghum bicolor
Sobic.010G191100 1.0kb downstream 1.0kb downstream 8658   true Chr10: 53234608-53243265 Sorghum bicolor
Sobic.010G191100 1.0kb downstream 1.0kb downstream 1000   false Chr10: 53234608-53235607 Sorghum bicolor
Sobic.010G191100 2.0kb upstream 2.0kb upstream 9658   true Chr10: 53235608-53245265 Sorghum bicolor
Sobic.010G191100 2.0kb upstream 2.0kb upstream 2000   false Chr10: 53243266-53245265 Sorghum bicolor
Sobic.010G191100 2.0kb downstream 2.0kb downstream 9658   true Chr10: 53233608-53243265 Sorghum bicolor
Sobic.010G191100 2.0kb downstream 2.0kb downstream 2000   false Chr10: 53233608-53235607 Sorghum bicolor
Sobic.010G191100 5.0kb upstream 5.0kb upstream 12658   true Chr10: 53235608-53248265 Sorghum bicolor
Sobic.010G191100 5.0kb upstream 5.0kb upstream 5000   false Chr10: 53243266-53248265 Sorghum bicolor
Sobic.010G191100 5.0kb downstream 5.0kb downstream 12658   true Chr10: 53230608-53243265 Sorghum bicolor
Sobic.010G191100 5.0kb downstream 5.0kb downstream 5000   false Chr10: 53230608-53235607 Sorghum bicolor
Sobic.010G191100 10.0kb upstream 10.0kb upstream 17658   true Chr10: 53235608-53253265 Sorghum bicolor
Sobic.010G191100 10.0kb upstream 10.0kb upstream 10000   false Chr10: 53243266-53253265 Sorghum bicolor
Sobic.010G191100 10.0kb downstream 10.0kb downstream 17658   true Chr10: 53225608-53243265 Sorghum bicolor
Sobic.010G191100 10.0kb downstream 10.0kb downstream 10000   false Chr10: 53225608-53235607 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179026 5267 Panicoideae View MSA
124581537 5269 Grass View MSA
122044005 5273 Angiosperm View MSA
121310224 5274 Embryophyte View MSA
123347772 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.335       High
cufflinks 0.112        
cufflinks 0.205        
cufflinks 0.249        
cufflinks 2.45       High
cufflinks 0.044     Low Low
cufflinks 0.732        
cufflinks 0.275        
cufflinks 0.044     Low Low
cufflinks 0.118        
cufflinks 0.125        
cufflinks 0.068     Low Low
cufflinks 0.187        
cufflinks 0.139        
cufflinks 2.07       High
cufflinks 0.155        
cufflinks 0.854       High
cufflinks 0.72        
cufflinks 0.2        
cufflinks 0.891       High
cufflinks 0.644        
cufflinks 0.102     Low  
cufflinks 0.119        
cufflinks 0.117        
cufflinks 0.067       Low
cufflinks 0.109        
cufflinks 0.032     Low Low
cufflinks 3.81       High
cufflinks 0.412        
cufflinks 1.528       High

0 Strain