Gene : Sobic.010G178500 S. bicolor v3.1.1
Defline:  (1 of 2) K03627 - putative transcription factor (MBF1) Genomic Order:  1883
Name:  ? Sobic.010G178500 Secondary Identifier:  ? PAC:37911041
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G178500 0.5kb upstream 0.5kb upstream 1529   true Chr10: 51650863-51652391 Sorghum bicolor
Sobic.010G178500 0.5kb upstream 0.5kb upstream 500   false Chr10: 51651892-51652391 Sorghum bicolor
Sobic.010G178500 0.5kb downstream 0.5kb downstream 1529   true Chr10: 51650363-51651891 Sorghum bicolor
Sobic.010G178500 0.5kb downstream 0.5kb downstream 500   false Chr10: 51650363-51650862 Sorghum bicolor
Sobic.010G178500 1.0kb upstream 1.0kb upstream 2029   true Chr10: 51650863-51652891 Sorghum bicolor
Sobic.010G178500 1.0kb upstream 1.0kb upstream 1000   false Chr10: 51651892-51652891 Sorghum bicolor
Sobic.010G178500 1.0kb downstream 1.0kb downstream 2029   true Chr10: 51649863-51651891 Sorghum bicolor
Sobic.010G178500 1.0kb downstream 1.0kb downstream 1000   false Chr10: 51649863-51650862 Sorghum bicolor
Sobic.010G178500 2.0kb upstream 2.0kb upstream 3029   true Chr10: 51650863-51653891 Sorghum bicolor
Sobic.010G178500 2.0kb upstream 2.0kb upstream 2000   false Chr10: 51651892-51653891 Sorghum bicolor
Sobic.010G178500 2.0kb downstream 2.0kb downstream 3029   true Chr10: 51648863-51651891 Sorghum bicolor
Sobic.010G178500 2.0kb downstream 2.0kb downstream 2000   false Chr10: 51648863-51650862 Sorghum bicolor
Sobic.010G178500 5.0kb upstream 5.0kb upstream 6029   true Chr10: 51650863-51656891 Sorghum bicolor
Sobic.010G178500 5.0kb upstream 5.0kb upstream 5000   false Chr10: 51651892-51656891 Sorghum bicolor
Sobic.010G178500 5.0kb downstream 5.0kb downstream 6029   true Chr10: 51645863-51651891 Sorghum bicolor
Sobic.010G178500 5.0kb downstream 5.0kb downstream 5000   false Chr10: 51645863-51650862 Sorghum bicolor
Sobic.010G178500 10.0kb upstream 10.0kb upstream 11029   true Chr10: 51650863-51661891 Sorghum bicolor
Sobic.010G178500 10.0kb upstream 10.0kb upstream 10000   false Chr10: 51651892-51661891 Sorghum bicolor
Sobic.010G178500 10.0kb downstream 10.0kb downstream 11029   true Chr10: 51640863-51651891 Sorghum bicolor
Sobic.010G178500 10.0kb downstream 10.0kb downstream 10000   false Chr10: 51640863-51650862 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026474 5273 Angiosperm View MSA
122195887 5267 Panicoideae View MSA
124572853 5269 Grass View MSA
121347865 5274 Embryophyte View MSA
123380657 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.785       High
cufflinks 0.015     Low Low
cufflinks 0.391        
cufflinks 0.484        
cufflinks 0.052     Low  
cufflinks 0.116        
cufflinks 0.014     Low Low
cufflinks 0.018     Low Low
cufflinks 0.273        
cufflinks 0.169        
cufflinks 0.094        
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low Low
cufflinks 0.261        
cufflinks 0.02     Low  
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.258        
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low Low
cufflinks 0.03     Low  
cufflinks 0.206        
cufflinks 0.146        
cufflinks 0.226        
cufflinks 45.376     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.319        

0 Strain