Gene : Sobic.008G159901 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR24362:SF218 - SERINE/THREONINE-PROTEIN KINASE NEK4 Genomic Order:  1672
Name:  ? Sobic.008G159901 Secondary Identifier:  ? PAC:37928174
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G159901 0.5kb upstream 0.5kb upstream 5560   true Chr08: 59308650-59314209 Sorghum bicolor
Sobic.008G159901 0.5kb upstream 0.5kb upstream 500   false Chr08: 59313710-59314209 Sorghum bicolor
Sobic.008G159901 0.5kb downstream 0.5kb downstream 5560   true Chr08: 59308150-59313709 Sorghum bicolor
Sobic.008G159901 0.5kb downstream 0.5kb downstream 500   false Chr08: 59308150-59308649 Sorghum bicolor
Sobic.008G159901 1.0kb upstream 1.0kb upstream 6060   true Chr08: 59308650-59314709 Sorghum bicolor
Sobic.008G159901 1.0kb upstream 1.0kb upstream 1000   false Chr08: 59313710-59314709 Sorghum bicolor
Sobic.008G159901 1.0kb downstream 1.0kb downstream 6060   true Chr08: 59307650-59313709 Sorghum bicolor
Sobic.008G159901 1.0kb downstream 1.0kb downstream 1000   false Chr08: 59307650-59308649 Sorghum bicolor
Sobic.008G159901 2.0kb upstream 2.0kb upstream 7060   true Chr08: 59308650-59315709 Sorghum bicolor
Sobic.008G159901 2.0kb upstream 2.0kb upstream 2000   false Chr08: 59313710-59315709 Sorghum bicolor
Sobic.008G159901 2.0kb downstream 2.0kb downstream 7060   true Chr08: 59306650-59313709 Sorghum bicolor
Sobic.008G159901 2.0kb downstream 2.0kb downstream 2000   false Chr08: 59306650-59308649 Sorghum bicolor
Sobic.008G159901 5.0kb upstream 5.0kb upstream 10060   true Chr08: 59308650-59318709 Sorghum bicolor
Sobic.008G159901 5.0kb upstream 5.0kb upstream 5000   false Chr08: 59313710-59318709 Sorghum bicolor
Sobic.008G159901 5.0kb downstream 5.0kb downstream 10060   true Chr08: 59303650-59313709 Sorghum bicolor
Sobic.008G159901 5.0kb downstream 5.0kb downstream 5000   false Chr08: 59303650-59308649 Sorghum bicolor
Sobic.008G159901 10.0kb upstream 10.0kb upstream 15060   true Chr08: 59308650-59323709 Sorghum bicolor
Sobic.008G159901 10.0kb upstream 10.0kb upstream 10000   false Chr08: 59313710-59323709 Sorghum bicolor
Sobic.008G159901 10.0kb downstream 10.0kb downstream 15060   true Chr08: 59298650-59313709 Sorghum bicolor
Sobic.008G159901 10.0kb downstream 10.0kb downstream 10000   false Chr08: 59298650-59308649 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191632 5267 Panicoideae View MSA
124589477 5269 Grass View MSA
122043022 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310065 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.667        
cufflinks 0.845        
cufflinks 1.214        
cufflinks 0.183       Low
cufflinks 6.401       High
cufflinks 0.776        
cufflinks 2.576        
cufflinks 1.062        
cufflinks 0.963        
cufflinks 1.207        
cufflinks 2.615        
cufflinks 2.291        
cufflinks 1.038        
cufflinks 2.557        
cufflinks 3.282        
cufflinks 1.088        
cufflinks 2.27        
cufflinks 2.509        
cufflinks 1.041        
cufflinks 2.335        
cufflinks 14.52     High High
cufflinks 3.327        
cufflinks 2.189        
cufflinks 2.568        
cufflinks 3.4        
cufflinks 0.359       Low
cufflinks 1.087        
cufflinks 0.383       Low
cufflinks 1.792        
cufflinks 1.858        

0 Strain