Gene : Sobic.010G255300 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10366//PTHR10366:SF343 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  2685
Name:  ? Sobic.010G255300 Secondary Identifier:  ? PAC:37909399
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G255300 0.5kb upstream 0.5kb upstream 5875   true Chr10: 59366953-59372827 Sorghum bicolor
Sobic.010G255300 0.5kb upstream 0.5kb upstream 500   false Chr10: 59372328-59372827 Sorghum bicolor
Sobic.010G255300 0.5kb downstream 0.5kb downstream 5875   true Chr10: 59366453-59372327 Sorghum bicolor
Sobic.010G255300 0.5kb downstream 0.5kb downstream 500   false Chr10: 59366453-59366952 Sorghum bicolor
Sobic.010G255300 1.0kb upstream 1.0kb upstream 6375   true Chr10: 59366953-59373327 Sorghum bicolor
Sobic.010G255300 1.0kb upstream 1.0kb upstream 1000   false Chr10: 59372328-59373327 Sorghum bicolor
Sobic.010G255300 1.0kb downstream 1.0kb downstream 6375   true Chr10: 59365953-59372327 Sorghum bicolor
Sobic.010G255300 1.0kb downstream 1.0kb downstream 1000   false Chr10: 59365953-59366952 Sorghum bicolor
Sobic.010G255300 2.0kb upstream 2.0kb upstream 7375   true Chr10: 59366953-59374327 Sorghum bicolor
Sobic.010G255300 2.0kb upstream 2.0kb upstream 2000   false Chr10: 59372328-59374327 Sorghum bicolor
Sobic.010G255300 2.0kb downstream 2.0kb downstream 7375   true Chr10: 59364953-59372327 Sorghum bicolor
Sobic.010G255300 2.0kb downstream 2.0kb downstream 2000   false Chr10: 59364953-59366952 Sorghum bicolor
Sobic.010G255300 5.0kb upstream 5.0kb upstream 10375   true Chr10: 59366953-59377327 Sorghum bicolor
Sobic.010G255300 5.0kb upstream 5.0kb upstream 5000   false Chr10: 59372328-59377327 Sorghum bicolor
Sobic.010G255300 5.0kb downstream 5.0kb downstream 10375   true Chr10: 59361953-59372327 Sorghum bicolor
Sobic.010G255300 5.0kb downstream 5.0kb downstream 5000   false Chr10: 59361953-59366952 Sorghum bicolor
Sobic.010G255300 10.0kb upstream 10.0kb upstream 15375   true Chr10: 59366953-59382327 Sorghum bicolor
Sobic.010G255300 10.0kb upstream 10.0kb upstream 10000   false Chr10: 59372328-59382327 Sorghum bicolor
Sobic.010G255300 10.0kb downstream 10.0kb downstream 15375   true Chr10: 59356953-59372327 Sorghum bicolor
Sobic.010G255300 10.0kb downstream 10.0kb downstream 10000   false Chr10: 59356953-59366952 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189662 5267 Panicoideae View MSA
124578350 5269 Grass View MSA
122046159 5273 Angiosperm View MSA
121349944 5274 Embryophyte View MSA
123424676 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.403       Low
cufflinks 92.025     High High
cufflinks 48.852     High High
cufflinks 16.378     High  
cufflinks 0.612        
cufflinks 15.982     High  
cufflinks 29.995     High High
cufflinks 33.528     High High
cufflinks 2.39        
cufflinks 2.026        
cufflinks 0.722        
cufflinks 0.856        
cufflinks 4.74        
cufflinks 0.405       Low
cufflinks 10.906        
cufflinks 73.664     High High
cufflinks 24.802     High High
cufflinks 33.714     High High
cufflinks 39.287     High High
cufflinks 20.041     High  
cufflinks 0.933        
cufflinks 0.552       Low
cufflinks 0.349       Low
cufflinks 0.398       Low
cufflinks 47.601     High High
cufflinks 64.474     High High
cufflinks 0.895        
cufflinks 2.539        
cufflinks 15.497     High  
cufflinks 6.793        

0 Strain