Gene : Sobic.010G241200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11014//PTHR11014:SF62 - PEPTIDASE M20 FAMILY MEMBER // IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 Genomic Order:  2538
Name:  ? Sobic.010G241200 Secondary Identifier:  ? PAC:37908712
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G241200 0.5kb upstream 0.5kb upstream 7660   true Chr10: 58282076-58289735 Sorghum bicolor
Sobic.010G241200 0.5kb upstream 0.5kb upstream 500   false Chr10: 58289236-58289735 Sorghum bicolor
Sobic.010G241200 0.5kb downstream 0.5kb downstream 7660   true Chr10: 58281576-58289235 Sorghum bicolor
Sobic.010G241200 0.5kb downstream 0.5kb downstream 500   false Chr10: 58281576-58282075 Sorghum bicolor
Sobic.010G241200 1.0kb upstream 1.0kb upstream 8160   true Chr10: 58282076-58290235 Sorghum bicolor
Sobic.010G241200 1.0kb upstream 1.0kb upstream 1000   false Chr10: 58289236-58290235 Sorghum bicolor
Sobic.010G241200 1.0kb downstream 1.0kb downstream 8160   true Chr10: 58281076-58289235 Sorghum bicolor
Sobic.010G241200 1.0kb downstream 1.0kb downstream 1000   false Chr10: 58281076-58282075 Sorghum bicolor
Sobic.010G241200 2.0kb upstream 2.0kb upstream 9160   true Chr10: 58282076-58291235 Sorghum bicolor
Sobic.010G241200 2.0kb upstream 2.0kb upstream 2000   false Chr10: 58289236-58291235 Sorghum bicolor
Sobic.010G241200 2.0kb downstream 2.0kb downstream 9160   true Chr10: 58280076-58289235 Sorghum bicolor
Sobic.010G241200 2.0kb downstream 2.0kb downstream 2000   false Chr10: 58280076-58282075 Sorghum bicolor
Sobic.010G241200 5.0kb upstream 5.0kb upstream 12160   true Chr10: 58282076-58294235 Sorghum bicolor
Sobic.010G241200 5.0kb upstream 5.0kb upstream 5000   false Chr10: 58289236-58294235 Sorghum bicolor
Sobic.010G241200 5.0kb downstream 5.0kb downstream 12160   true Chr10: 58277076-58289235 Sorghum bicolor
Sobic.010G241200 5.0kb downstream 5.0kb downstream 5000   false Chr10: 58277076-58282075 Sorghum bicolor
Sobic.010G241200 10.0kb upstream 10.0kb upstream 17160   true Chr10: 58282076-58299235 Sorghum bicolor
Sobic.010G241200 10.0kb upstream 10.0kb upstream 10000   false Chr10: 58289236-58299235 Sorghum bicolor
Sobic.010G241200 10.0kb downstream 10.0kb downstream 17160   true Chr10: 58272076-58289235 Sorghum bicolor
Sobic.010G241200 10.0kb downstream 10.0kb downstream 10000   false Chr10: 58272076-58282075 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176720 5267 Panicoideae View MSA
124580515 5269 Grass View MSA
122047186 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.185        
cufflinks 3.547       High
cufflinks 0.971        
cufflinks 0.531        
cufflinks 1.36        
cufflinks 1.567        
cufflinks 0.537        
cufflinks 1.236        
cufflinks 0.357        
cufflinks 0.224        
cufflinks 0.91        
cufflinks 0.163        
cufflinks 0.588        
cufflinks 0.106       Low
cufflinks 0.303        
cufflinks 0.702        
cufflinks 0.391        
cufflinks 0.365        
cufflinks 1.531        
cufflinks 0.202        
cufflinks 0.018     Low Low
cufflinks 0.186        
cufflinks 0.059     Low Low
cufflinks 0.053     Low Low
cufflinks 3.207       High
cufflinks 3.852       High
cufflinks 0.586        
cufflinks 0.006     Low Low
cufflinks 3.061       High
cufflinks 0.251        

0 Strain