Gene : Sobic.K010100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR30509 - P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED Genomic Order:  4
Name:  ? Sobic.K010100 Secondary Identifier:  ? PAC:37912463
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.K010100 0.5kb upstream 0.5kb upstream 3314 true super_120: 30725-34038 Sorghum bicolor
Sobic.K010100 0.5kb upstream 0.5kb upstream 377 false super_120: 33662-34038 Sorghum bicolor
Sobic.K010100 0.5kb downstream 0.5kb downstream 3437 true super_120: 30225-33661 Sorghum bicolor
Sobic.K010100 0.5kb downstream 0.5kb downstream 500 false super_120: 30225-30724 Sorghum bicolor
Sobic.K010100 1.0kb upstream 1.0kb upstream 3314 true super_120: 30725-34038 Sorghum bicolor
Sobic.K010100 1.0kb upstream 1.0kb upstream 377 false super_120: 33662-34038 Sorghum bicolor
Sobic.K010100 1.0kb downstream 1.0kb downstream 3937 true super_120: 29725-33661 Sorghum bicolor
Sobic.K010100 1.0kb downstream 1.0kb downstream 1000 false super_120: 29725-30724 Sorghum bicolor
Sobic.K010100 2.0kb upstream 2.0kb upstream 3314 true super_120: 30725-34038 Sorghum bicolor
Sobic.K010100 2.0kb upstream 2.0kb upstream 377 false super_120: 33662-34038 Sorghum bicolor
Sobic.K010100 2.0kb downstream 2.0kb downstream 4937 true super_120: 28725-33661 Sorghum bicolor
Sobic.K010100 2.0kb downstream 2.0kb downstream 2000 false super_120: 28725-30724 Sorghum bicolor
Sobic.K010100 5.0kb upstream 5.0kb upstream 3314 true super_120: 30725-34038 Sorghum bicolor
Sobic.K010100 5.0kb upstream 5.0kb upstream 377 false super_120: 33662-34038 Sorghum bicolor
Sobic.K010100 5.0kb downstream 5.0kb downstream 7937 true super_120: 25725-33661 Sorghum bicolor
Sobic.K010100 5.0kb downstream 5.0kb downstream 5000 false super_120: 25725-30724 Sorghum bicolor
Sobic.K010100 10.0kb upstream 10.0kb upstream 3314 true super_120: 30725-34038 Sorghum bicolor
Sobic.K010100 10.0kb upstream 10.0kb upstream 377 false super_120: 33662-34038 Sorghum bicolor
Sobic.K010100 10.0kb downstream 10.0kb downstream 12937 true super_120: 20725-33661 Sorghum bicolor
Sobic.K010100 10.0kb downstream 10.0kb downstream 10000 false super_120: 20725-30724 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193226 5267 Panicoideae View MSA
124584938 5269 Grass View MSA
122049763 5273 Angiosperm View MSA
121311579 5274 Embryophyte View MSA
123426267 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low Low
cufflinks 0.224        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.107        
cufflinks 0.271        
cufflinks 0.211        
cufflinks 0.25        
cufflinks 0.012     Low Low
cufflinks 0.011     Low Low
cufflinks 5.399       High
cufflinks 3.157       High
cufflinks 0.033     Low  
cufflinks 6.134       High
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.208        
cufflinks 0.223        
cufflinks 0.05     Low  
cufflinks 0.092     Low  
cufflinks 0.035     Low  
cufflinks 0.502        
cufflinks 0.416        
cufflinks 0.624        
cufflinks 0.092        
cufflinks 0.046        
cufflinks 0.547        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.054     Low  
cufflinks 0.01     Low Low

0 Strain