Gene : Sobic.010G277500 S. bicolor v3.1.1
Defline:  (1 of 11) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  2920
Name:  ? Sobic.010G277500 Secondary Identifier:  ? PAC:37910818
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G277500 0.5kb upstream 0.5kb upstream 7720   true Chr10: 61020368-61028087 Sorghum bicolor
Sobic.010G277500 0.5kb upstream 0.5kb upstream 500   false Chr10: 61027588-61028087 Sorghum bicolor
Sobic.010G277500 0.5kb downstream 0.5kb downstream 7720   true Chr10: 61019868-61027587 Sorghum bicolor
Sobic.010G277500 0.5kb downstream 0.5kb downstream 500   false Chr10: 61019868-61020367 Sorghum bicolor
Sobic.010G277500 1.0kb upstream 1.0kb upstream 8220   true Chr10: 61020368-61028587 Sorghum bicolor
Sobic.010G277500 1.0kb upstream 1.0kb upstream 1000   false Chr10: 61027588-61028587 Sorghum bicolor
Sobic.010G277500 1.0kb downstream 1.0kb downstream 8220   true Chr10: 61019368-61027587 Sorghum bicolor
Sobic.010G277500 1.0kb downstream 1.0kb downstream 1000   false Chr10: 61019368-61020367 Sorghum bicolor
Sobic.010G277500 2.0kb upstream 2.0kb upstream 9220   true Chr10: 61020368-61029587 Sorghum bicolor
Sobic.010G277500 2.0kb upstream 2.0kb upstream 2000   false Chr10: 61027588-61029587 Sorghum bicolor
Sobic.010G277500 2.0kb downstream 2.0kb downstream 9220   true Chr10: 61018368-61027587 Sorghum bicolor
Sobic.010G277500 2.0kb downstream 2.0kb downstream 2000   false Chr10: 61018368-61020367 Sorghum bicolor
Sobic.010G277500 5.0kb upstream 5.0kb upstream 12220   true Chr10: 61020368-61032587 Sorghum bicolor
Sobic.010G277500 5.0kb upstream 5.0kb upstream 5000   false Chr10: 61027588-61032587 Sorghum bicolor
Sobic.010G277500 5.0kb downstream 5.0kb downstream 12220   true Chr10: 61015368-61027587 Sorghum bicolor
Sobic.010G277500 5.0kb downstream 5.0kb downstream 5000   false Chr10: 61015368-61020367 Sorghum bicolor
Sobic.010G277500 10.0kb upstream 10.0kb upstream 17220   true Chr10: 61020368-61037587 Sorghum bicolor
Sobic.010G277500 10.0kb upstream 10.0kb upstream 10000   false Chr10: 61027588-61037587 Sorghum bicolor
Sobic.010G277500 10.0kb downstream 10.0kb downstream 17220   true Chr10: 61010368-61027587 Sorghum bicolor
Sobic.010G277500 10.0kb downstream 10.0kb downstream 10000   false Chr10: 61010368-61020367 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181605 5267 Panicoideae View MSA
124568509 5269 Grass View MSA
122049014 5273 Angiosperm View MSA
121311208 5274 Embryophyte View MSA
123348533 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.901       Low
cufflinks 2.166       Low
cufflinks 3.349        
cufflinks 2.699        
cufflinks 4.465        
cufflinks 4.851        
cufflinks 3.322        
cufflinks 2.795        
cufflinks 7.126       High
cufflinks 6.159       High
cufflinks 3.034        
cufflinks 3.704        
cufflinks 7.556       High
cufflinks 3.247        
cufflinks 6.908       High
cufflinks 5.129        
cufflinks 3.26        
cufflinks 3.153        
cufflinks 4.63        
cufflinks 4.639        
cufflinks 10.436       High
cufflinks 2.903        
cufflinks 2.644        
cufflinks 2.48        
cufflinks 4.32        
cufflinks 2.897        
cufflinks 3.178        
cufflinks 3.433        
cufflinks 2.056       Low
cufflinks 7.881       High

0 Strain