Gene : Sobic.010G262200 S. bicolor v3.1.1
Defline:  (1 of 23) PF00643 - B-box zinc finger (zf-B_box) Genomic Order:  2759
Name:  ? Sobic.010G262200 Secondary Identifier:  ? PAC:37908461
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G262200 0.5kb upstream 0.5kb upstream 2205   true Chr10: 59870379-59872583 Sorghum bicolor
Sobic.010G262200 0.5kb upstream 0.5kb upstream 500   false Chr10: 59872084-59872583 Sorghum bicolor
Sobic.010G262200 0.5kb downstream 0.5kb downstream 2205   true Chr10: 59869879-59872083 Sorghum bicolor
Sobic.010G262200 0.5kb downstream 0.5kb downstream 500   false Chr10: 59869879-59870378 Sorghum bicolor
Sobic.010G262200 1.0kb upstream 1.0kb upstream 2705   true Chr10: 59870379-59873083 Sorghum bicolor
Sobic.010G262200 1.0kb upstream 1.0kb upstream 1000   false Chr10: 59872084-59873083 Sorghum bicolor
Sobic.010G262200 1.0kb downstream 1.0kb downstream 2705   true Chr10: 59869379-59872083 Sorghum bicolor
Sobic.010G262200 1.0kb downstream 1.0kb downstream 1000   false Chr10: 59869379-59870378 Sorghum bicolor
Sobic.010G262200 2.0kb upstream 2.0kb upstream 3705   true Chr10: 59870379-59874083 Sorghum bicolor
Sobic.010G262200 2.0kb upstream 2.0kb upstream 2000   false Chr10: 59872084-59874083 Sorghum bicolor
Sobic.010G262200 2.0kb downstream 2.0kb downstream 3705   true Chr10: 59868379-59872083 Sorghum bicolor
Sobic.010G262200 2.0kb downstream 2.0kb downstream 2000   false Chr10: 59868379-59870378 Sorghum bicolor
Sobic.010G262200 5.0kb upstream 5.0kb upstream 6705   true Chr10: 59870379-59877083 Sorghum bicolor
Sobic.010G262200 5.0kb upstream 5.0kb upstream 5000   false Chr10: 59872084-59877083 Sorghum bicolor
Sobic.010G262200 5.0kb downstream 5.0kb downstream 6705   true Chr10: 59865379-59872083 Sorghum bicolor
Sobic.010G262200 5.0kb downstream 5.0kb downstream 5000   false Chr10: 59865379-59870378 Sorghum bicolor
Sobic.010G262200 10.0kb upstream 10.0kb upstream 11705   true Chr10: 59870379-59882083 Sorghum bicolor
Sobic.010G262200 10.0kb upstream 10.0kb upstream 10000   false Chr10: 59872084-59882083 Sorghum bicolor
Sobic.010G262200 10.0kb downstream 10.0kb downstream 11705   true Chr10: 59860379-59872083 Sorghum bicolor
Sobic.010G262200 10.0kb downstream 10.0kb downstream 10000   false Chr10: 59860379-59870378 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186539 5267 Panicoideae View MSA
124586806 5269 Grass View MSA
122049628 5273 Angiosperm View MSA
121350336 5274 Embryophyte View MSA
123427282 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.724       High
cufflinks 0.064       Low
cufflinks 0.099       Low
cufflinks 0.289        
cufflinks 1.465        
cufflinks 2.512        
cufflinks 0.171       Low
cufflinks 0.161       Low
cufflinks 2.111        
cufflinks 2.025        
cufflinks 1.094        
cufflinks 1.978        
cufflinks 1.47        
cufflinks 2.626        
cufflinks 1.28        
cufflinks 0.205        
cufflinks 0.199        
cufflinks 0.132       Low
cufflinks 0.879        
cufflinks 0.321        
cufflinks 0.068     Low Low
cufflinks 2.594        
cufflinks 1.391        
cufflinks 1.216        
cufflinks 0.048     Low Low
cufflinks 0.016     Low Low
cufflinks 1.681        
cufflinks 7.65       High
cufflinks 0.429        
cufflinks 1.19        

0 Strain