Gene : Sobic.003G044300 S. bicolor v3.1.1
Defline:  (1 of 1) K07560 - D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] (dtd, DTD1) Genomic Order:  464
Name:  ? Sobic.003G044300 Secondary Identifier:  ? PAC:37914298
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G044300 0.5kb upstream 0.5kb upstream 3252 true Chr03: 4075681-4078932 Sorghum bicolor
Sobic.003G044300 0.5kb upstream 0.5kb upstream 500 false Chr03: 4075681-4076180 Sorghum bicolor
Sobic.003G044300 0.5kb downstream 0.5kb downstream 3252 true Chr03: 4076181-4079432 Sorghum bicolor
Sobic.003G044300 0.5kb downstream 0.5kb downstream 500 false Chr03: 4078933-4079432 Sorghum bicolor
Sobic.003G044300 1.0kb upstream 1.0kb upstream 3752 true Chr03: 4075181-4078932 Sorghum bicolor
Sobic.003G044300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 4075181-4076180 Sorghum bicolor
Sobic.003G044300 1.0kb downstream 1.0kb downstream 3752 true Chr03: 4076181-4079932 Sorghum bicolor
Sobic.003G044300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 4078933-4079932 Sorghum bicolor
Sobic.003G044300 2.0kb upstream 2.0kb upstream 4752 true Chr03: 4074181-4078932 Sorghum bicolor
Sobic.003G044300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 4074181-4076180 Sorghum bicolor
Sobic.003G044300 2.0kb downstream 2.0kb downstream 4752 true Chr03: 4076181-4080932 Sorghum bicolor
Sobic.003G044300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 4078933-4080932 Sorghum bicolor
Sobic.003G044300 5.0kb upstream 5.0kb upstream 7752 true Chr03: 4071181-4078932 Sorghum bicolor
Sobic.003G044300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 4071181-4076180 Sorghum bicolor
Sobic.003G044300 5.0kb downstream 5.0kb downstream 7752 true Chr03: 4076181-4083932 Sorghum bicolor
Sobic.003G044300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 4078933-4083932 Sorghum bicolor
Sobic.003G044300 10.0kb upstream 10.0kb upstream 12752 true Chr03: 4066181-4078932 Sorghum bicolor
Sobic.003G044300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 4066181-4076180 Sorghum bicolor
Sobic.003G044300 10.0kb downstream 10.0kb downstream 12752 true Chr03: 4076181-4088932 Sorghum bicolor
Sobic.003G044300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 4078933-4088932 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184311 5267 Panicoideae View MSA
124579029 5269 Grass View MSA
122044968 5273 Angiosperm View MSA
121347262 5274 Embryophyte View MSA
123424292 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.752        
cufflinks 0.799       Low
cufflinks 1.762       Low
cufflinks 3.694        
cufflinks 6.335       High
cufflinks 4.533        
cufflinks 3.29        
cufflinks 2.306        
cufflinks 6.32       High
cufflinks 7.138       High
cufflinks 3.089        
cufflinks 3.967        
cufflinks 5.047        
cufflinks 4.725        
cufflinks 5.465        
cufflinks 1.33       Low
cufflinks 3.325        
cufflinks 3.667        
cufflinks 1.339       Low
cufflinks 4.306        
cufflinks 5.88        
cufflinks 4.274        
cufflinks 4.36        
cufflinks 4.009        
cufflinks 0.799       Low
cufflinks 0.873       Low
cufflinks 3.585        
cufflinks 3.563        
cufflinks 3.696        
cufflinks 6.291        

0 Strain