Gene : Sobic.003G125400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12735//PTHR12735:SF20 - BOLA-LIKE PROTEIN-RELATED // BOLA-LIKE PROTEIN 1 Genomic Order:  1308
Name:  ? Sobic.003G125400 Secondary Identifier:  ? PAC:37917864
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G125400 0.5kb upstream 0.5kb upstream 5451 true Chr03: 11380756-11386206 Sorghum bicolor
Sobic.003G125400 0.5kb upstream 0.5kb upstream 500 false Chr03: 11385707-11386206 Sorghum bicolor
Sobic.003G125400 0.5kb downstream 0.5kb downstream 5451 true Chr03: 11380256-11385706 Sorghum bicolor
Sobic.003G125400 0.5kb downstream 0.5kb downstream 500 false Chr03: 11380256-11380755 Sorghum bicolor
Sobic.003G125400 1.0kb upstream 1.0kb upstream 5951 true Chr03: 11380756-11386706 Sorghum bicolor
Sobic.003G125400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11385707-11386706 Sorghum bicolor
Sobic.003G125400 1.0kb downstream 1.0kb downstream 5951 true Chr03: 11379756-11385706 Sorghum bicolor
Sobic.003G125400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11379756-11380755 Sorghum bicolor
Sobic.003G125400 2.0kb upstream 2.0kb upstream 6951 true Chr03: 11380756-11387706 Sorghum bicolor
Sobic.003G125400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11385707-11387706 Sorghum bicolor
Sobic.003G125400 2.0kb downstream 2.0kb downstream 6951 true Chr03: 11378756-11385706 Sorghum bicolor
Sobic.003G125400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11378756-11380755 Sorghum bicolor
Sobic.003G125400 5.0kb upstream 5.0kb upstream 9951 true Chr03: 11380756-11390706 Sorghum bicolor
Sobic.003G125400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11385707-11390706 Sorghum bicolor
Sobic.003G125400 5.0kb downstream 5.0kb downstream 9951 true Chr03: 11375756-11385706 Sorghum bicolor
Sobic.003G125400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11375756-11380755 Sorghum bicolor
Sobic.003G125400 10.0kb upstream 10.0kb upstream 14951 true Chr03: 11380756-11395706 Sorghum bicolor
Sobic.003G125400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11385707-11395706 Sorghum bicolor
Sobic.003G125400 10.0kb downstream 10.0kb downstream 14951 true Chr03: 11370756-11385706 Sorghum bicolor
Sobic.003G125400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11370756-11380755 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190344 5267 Panicoideae View MSA
124574151 5269 Grass View MSA
122047873 5273 Angiosperm View MSA
121346278 5274 Embryophyte View MSA
123428426 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.007       High
cufflinks 1.583        
cufflinks 1.244        
cufflinks 2.116       High
cufflinks 0.744        
cufflinks 0.95        
cufflinks 2.14       High
cufflinks 1.995       High
cufflinks 0.772        
cufflinks 0.872        
cufflinks 0.491        
cufflinks 0.513        
cufflinks 0.462       Low
cufflinks 0.631        
cufflinks 0.674        
cufflinks 1.768        
cufflinks 2.027       High
cufflinks 2.232       High
cufflinks 1.895       High
cufflinks 1.705        
cufflinks 0.666        
cufflinks 0.533        
cufflinks 0.615        
cufflinks 0.606        
cufflinks 1.498        
cufflinks 1.812        
cufflinks 0.358       Low
cufflinks 4.379       High
cufflinks 2.927       High
cufflinks 0.742        

0 Strain