Gene : Sobic.003G135500 S. bicolor v3.1.1
Defline:  similar to OSJNBa0004B13.7 protein Genomic Order:  1417
Name:  ? Sobic.003G135500 Secondary Identifier:  ? PAC:37918046
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G135500 0.5kb upstream 0.5kb upstream 8311 true Chr03: 12864715-12873025 Sorghum bicolor
Sobic.003G135500 0.5kb upstream 0.5kb upstream 500 false Chr03: 12872526-12873025 Sorghum bicolor
Sobic.003G135500 0.5kb downstream 0.5kb downstream 8311 true Chr03: 12864215-12872525 Sorghum bicolor
Sobic.003G135500 0.5kb downstream 0.5kb downstream 500 false Chr03: 12864215-12864714 Sorghum bicolor
Sobic.003G135500 1.0kb upstream 1.0kb upstream 8811 true Chr03: 12864715-12873525 Sorghum bicolor
Sobic.003G135500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 12872526-12873525 Sorghum bicolor
Sobic.003G135500 1.0kb downstream 1.0kb downstream 8811 true Chr03: 12863715-12872525 Sorghum bicolor
Sobic.003G135500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 12863715-12864714 Sorghum bicolor
Sobic.003G135500 2.0kb upstream 2.0kb upstream 9811 true Chr03: 12864715-12874525 Sorghum bicolor
Sobic.003G135500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 12872526-12874525 Sorghum bicolor
Sobic.003G135500 2.0kb downstream 2.0kb downstream 9811 true Chr03: 12862715-12872525 Sorghum bicolor
Sobic.003G135500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 12862715-12864714 Sorghum bicolor
Sobic.003G135500 5.0kb upstream 5.0kb upstream 12811 true Chr03: 12864715-12877525 Sorghum bicolor
Sobic.003G135500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 12872526-12877525 Sorghum bicolor
Sobic.003G135500 5.0kb downstream 5.0kb downstream 12811 true Chr03: 12859715-12872525 Sorghum bicolor
Sobic.003G135500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 12859715-12864714 Sorghum bicolor
Sobic.003G135500 10.0kb upstream 10.0kb upstream 17811 true Chr03: 12864715-12882525 Sorghum bicolor
Sobic.003G135500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 12872526-12882525 Sorghum bicolor
Sobic.003G135500 10.0kb downstream 10.0kb downstream 17811 true Chr03: 12854715-12872525 Sorghum bicolor
Sobic.003G135500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 12854715-12864714 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183561 5267 Panicoideae View MSA
124570478 5269 Grass View MSA
122047134 5273 Angiosperm View MSA
121347972 5274 Embryophyte View MSA
123380696 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.385        
cufflinks 0.167       Low
cufflinks 0.513       Low
cufflinks 0.651        
cufflinks 2.395        
cufflinks 1.607        
cufflinks 1.411        
cufflinks 0.388       Low
cufflinks 2.465        
cufflinks 2.43        
cufflinks 1.035        
cufflinks 1.756        
cufflinks 2.123        
cufflinks 1.691        
cufflinks 1.82        
cufflinks 0.381       Low
cufflinks 1.238        
cufflinks 1.386        
cufflinks 0.277       Low
cufflinks 1.321        
cufflinks 3.955       High
cufflinks 1.768        
cufflinks 1.838        
cufflinks 1.975        
cufflinks 0.421       Low
cufflinks 0.266       Low
cufflinks 1.006        
cufflinks 0.554       Low
cufflinks 1.088        
cufflinks 1.856        

0 Strain