Gene : Sobic.003G113900 S. bicolor v3.1.1
Defline:  (1 of 1) K13152 - U11/U12 small nuclear ribonucleoprotein 20 kDa protein (ZMAT5) Genomic Order:  1187
Name:  ? Sobic.003G113900 Secondary Identifier:  ? PAC:37917705
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G113900 0.5kb upstream 0.5kb upstream 4050 true Chr03: 10261984-10266033 Sorghum bicolor
Sobic.003G113900 0.5kb upstream 0.5kb upstream 500 false Chr03: 10261984-10262483 Sorghum bicolor
Sobic.003G113900 0.5kb downstream 0.5kb downstream 4050 true Chr03: 10262484-10266533 Sorghum bicolor
Sobic.003G113900 0.5kb downstream 0.5kb downstream 500 false Chr03: 10266034-10266533 Sorghum bicolor
Sobic.003G113900 1.0kb upstream 1.0kb upstream 4550 true Chr03: 10261484-10266033 Sorghum bicolor
Sobic.003G113900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 10261484-10262483 Sorghum bicolor
Sobic.003G113900 1.0kb downstream 1.0kb downstream 4550 true Chr03: 10262484-10267033 Sorghum bicolor
Sobic.003G113900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 10266034-10267033 Sorghum bicolor
Sobic.003G113900 2.0kb upstream 2.0kb upstream 5550 true Chr03: 10260484-10266033 Sorghum bicolor
Sobic.003G113900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 10260484-10262483 Sorghum bicolor
Sobic.003G113900 2.0kb downstream 2.0kb downstream 5550 true Chr03: 10262484-10268033 Sorghum bicolor
Sobic.003G113900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 10266034-10268033 Sorghum bicolor
Sobic.003G113900 5.0kb upstream 5.0kb upstream 8550 true Chr03: 10257484-10266033 Sorghum bicolor
Sobic.003G113900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 10257484-10262483 Sorghum bicolor
Sobic.003G113900 5.0kb downstream 5.0kb downstream 8550 true Chr03: 10262484-10271033 Sorghum bicolor
Sobic.003G113900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 10266034-10271033 Sorghum bicolor
Sobic.003G113900 10.0kb upstream 10.0kb upstream 13550 true Chr03: 10252484-10266033 Sorghum bicolor
Sobic.003G113900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 10252484-10262483 Sorghum bicolor
Sobic.003G113900 10.0kb downstream 10.0kb downstream 13550 true Chr03: 10262484-10276033 Sorghum bicolor
Sobic.003G113900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 10266034-10276033 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177978 5267 Panicoideae View MSA
124570849 5269 Grass View MSA
122049396 5273 Angiosperm View MSA
121346346 5274 Embryophyte View MSA
123380370 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.988        
cufflinks 0.407       Low
cufflinks 0.766       Low
cufflinks 1.429        
cufflinks 1.855        
cufflinks 2.816        
cufflinks 2.374        
cufflinks 2.545        
cufflinks 2.162        
cufflinks 2.139        
cufflinks 1.934        
cufflinks 1.875        
cufflinks 4.397       High
cufflinks 1.746        
cufflinks 1.719        
cufflinks 0.407       Low
cufflinks 2.031        
cufflinks 2.391        
cufflinks 0.456       Low
cufflinks 2.171        
cufflinks 1.672        
cufflinks 1.685        
cufflinks 1.918        
cufflinks 1.972        
cufflinks 0.629       Low
cufflinks 0.351       Low
cufflinks 1.653        
cufflinks 1.122        
cufflinks 2.561        
cufflinks 1.996        

0 Strain