Gene : Sobic.003G117700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12506//PTHR12506:SF26 - PROTEIN PHOSPHATASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  1227
Name:  ? Sobic.003G117700 Secondary Identifier:  ? PAC:37916234
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G117700 0.5kb upstream 0.5kb upstream 8411 true Chr03: 10614775-10623185 Sorghum bicolor
Sobic.003G117700 0.5kb upstream 0.5kb upstream 500 false Chr03: 10622686-10623185 Sorghum bicolor
Sobic.003G117700 0.5kb downstream 0.5kb downstream 8411 true Chr03: 10614275-10622685 Sorghum bicolor
Sobic.003G117700 0.5kb downstream 0.5kb downstream 500 false Chr03: 10614275-10614774 Sorghum bicolor
Sobic.003G117700 1.0kb upstream 1.0kb upstream 8911 true Chr03: 10614775-10623685 Sorghum bicolor
Sobic.003G117700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 10622686-10623685 Sorghum bicolor
Sobic.003G117700 1.0kb downstream 1.0kb downstream 8911 true Chr03: 10613775-10622685 Sorghum bicolor
Sobic.003G117700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 10613775-10614774 Sorghum bicolor
Sobic.003G117700 2.0kb upstream 2.0kb upstream 9911 true Chr03: 10614775-10624685 Sorghum bicolor
Sobic.003G117700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 10622686-10624685 Sorghum bicolor
Sobic.003G117700 2.0kb downstream 2.0kb downstream 9911 true Chr03: 10612775-10622685 Sorghum bicolor
Sobic.003G117700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 10612775-10614774 Sorghum bicolor
Sobic.003G117700 5.0kb upstream 5.0kb upstream 12911 true Chr03: 10614775-10627685 Sorghum bicolor
Sobic.003G117700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 10622686-10627685 Sorghum bicolor
Sobic.003G117700 5.0kb downstream 5.0kb downstream 12911 true Chr03: 10609775-10622685 Sorghum bicolor
Sobic.003G117700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 10609775-10614774 Sorghum bicolor
Sobic.003G117700 10.0kb upstream 10.0kb upstream 17911 true Chr03: 10614775-10632685 Sorghum bicolor
Sobic.003G117700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 10622686-10632685 Sorghum bicolor
Sobic.003G117700 10.0kb downstream 10.0kb downstream 17911 true Chr03: 10604775-10622685 Sorghum bicolor
Sobic.003G117700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 10604775-10614774 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180395 5267 Panicoideae View MSA
124588177 5269 Grass View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.384       Low
cufflinks 7.582     High  
cufflinks 13.292     High  
cufflinks 12.366     High  
cufflinks 15.492     High High
cufflinks 9.708        
cufflinks 9.567        
cufflinks 9.959     High  
cufflinks 11.914        
cufflinks 12.705     High  
cufflinks 7.366        
cufflinks 8.746        
cufflinks 14.257     High High
cufflinks 8.972        
cufflinks 16.427     High High
cufflinks 6.205       Low
cufflinks 9.516        
cufflinks 8.818        
cufflinks 15.96     High High
cufflinks 9.317        
cufflinks 12.717        
cufflinks 6.215       Low
cufflinks 7.983        
cufflinks 8.083        
cufflinks 12.665     High  
cufflinks 9.547     High  
cufflinks 10.026        
cufflinks 8.726        
cufflinks 8.225        
cufflinks 18.512     High High

0 Strain