Gene : Sobic.003G202800 S. bicolor v3.1.1
Defline:  similar to Holocarboxylase synthetase Genomic Order:  2130
Name:  ? Sobic.003G202800 Secondary Identifier:  ? PAC:37916937
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G202800 0.5kb upstream 0.5kb upstream 3246 true Chr03: 53279551-53282796 Sorghum bicolor
Sobic.003G202800 0.5kb upstream 0.5kb upstream 500 false Chr03: 53282297-53282796 Sorghum bicolor
Sobic.003G202800 0.5kb downstream 0.5kb downstream 3246 true Chr03: 53279051-53282296 Sorghum bicolor
Sobic.003G202800 0.5kb downstream 0.5kb downstream 500 false Chr03: 53279051-53279550 Sorghum bicolor
Sobic.003G202800 1.0kb upstream 1.0kb upstream 3746 true Chr03: 53279551-53283296 Sorghum bicolor
Sobic.003G202800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53282297-53283296 Sorghum bicolor
Sobic.003G202800 1.0kb downstream 1.0kb downstream 3746 true Chr03: 53278551-53282296 Sorghum bicolor
Sobic.003G202800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53278551-53279550 Sorghum bicolor
Sobic.003G202800 2.0kb upstream 2.0kb upstream 4746 true Chr03: 53279551-53284296 Sorghum bicolor
Sobic.003G202800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53282297-53284296 Sorghum bicolor
Sobic.003G202800 2.0kb downstream 2.0kb downstream 4746 true Chr03: 53277551-53282296 Sorghum bicolor
Sobic.003G202800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53277551-53279550 Sorghum bicolor
Sobic.003G202800 5.0kb upstream 5.0kb upstream 7746 true Chr03: 53279551-53287296 Sorghum bicolor
Sobic.003G202800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53282297-53287296 Sorghum bicolor
Sobic.003G202800 5.0kb downstream 5.0kb downstream 7746 true Chr03: 53274551-53282296 Sorghum bicolor
Sobic.003G202800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53274551-53279550 Sorghum bicolor
Sobic.003G202800 10.0kb upstream 10.0kb upstream 12746 true Chr03: 53279551-53292296 Sorghum bicolor
Sobic.003G202800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53282297-53292296 Sorghum bicolor
Sobic.003G202800 10.0kb downstream 10.0kb downstream 12746 true Chr03: 53269551-53282296 Sorghum bicolor
Sobic.003G202800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53269551-53279550 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181371 5267 Panicoideae View MSA
124588679 5269 Grass View MSA
122042623 5273 Angiosperm View MSA
121349599 5274 Embryophyte View MSA
123428775 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.498     High  
cufflinks 14.701     High Low
cufflinks 32.764     High  
cufflinks 54.138     High High
cufflinks 22.135     High  
cufflinks 49.837     High High
cufflinks 26.119     High  
cufflinks 23.758     High  
cufflinks 39.957     High High
cufflinks 37.446     High  
cufflinks 21.249     High  
cufflinks 30.234     High  
cufflinks 33.977     High  
cufflinks 26.597     High  
cufflinks 29.808     High  
cufflinks 35.406     High  
cufflinks 26.937     High  
cufflinks 27.903     High  
cufflinks 23.552     High  
cufflinks 36.795     High  
cufflinks 17.46     High Low
cufflinks 23.677     High  
cufflinks 23.839     High  
cufflinks 21.278     High  
cufflinks 19.613     High  
cufflinks 14.3     High Low
cufflinks 32.17     High  
cufflinks 61.507     High High
cufflinks 28.88     High  
cufflinks 28.007     High  

0 Strain