Gene : Sobic.003G165800 S. bicolor v3.1.1
Defline:  (1 of 1) 2.4.1.227 - Undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase / Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase Genomic Order:  1732
Name:  ? Sobic.003G165800 Secondary Identifier:  ? PAC:37915255
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G165800 0.5kb upstream 0.5kb upstream 9461 true Chr03: 23661954-23671414 Sorghum bicolor
Sobic.003G165800 0.5kb upstream 0.5kb upstream 500 false Chr03: 23670915-23671414 Sorghum bicolor
Sobic.003G165800 0.5kb downstream 0.5kb downstream 9461 true Chr03: 23661454-23670914 Sorghum bicolor
Sobic.003G165800 0.5kb downstream 0.5kb downstream 500 false Chr03: 23661454-23661953 Sorghum bicolor
Sobic.003G165800 1.0kb upstream 1.0kb upstream 9961 true Chr03: 23661954-23671914 Sorghum bicolor
Sobic.003G165800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 23670915-23671914 Sorghum bicolor
Sobic.003G165800 1.0kb downstream 1.0kb downstream 9961 true Chr03: 23660954-23670914 Sorghum bicolor
Sobic.003G165800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 23660954-23661953 Sorghum bicolor
Sobic.003G165800 2.0kb upstream 2.0kb upstream 10961 true Chr03: 23661954-23672914 Sorghum bicolor
Sobic.003G165800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 23670915-23672914 Sorghum bicolor
Sobic.003G165800 2.0kb downstream 2.0kb downstream 10961 true Chr03: 23659954-23670914 Sorghum bicolor
Sobic.003G165800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 23659954-23661953 Sorghum bicolor
Sobic.003G165800 5.0kb upstream 5.0kb upstream 13961 true Chr03: 23661954-23675914 Sorghum bicolor
Sobic.003G165800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 23670915-23675914 Sorghum bicolor
Sobic.003G165800 5.0kb downstream 5.0kb downstream 13961 true Chr03: 23656954-23670914 Sorghum bicolor
Sobic.003G165800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 23656954-23661953 Sorghum bicolor
Sobic.003G165800 10.0kb upstream 10.0kb upstream 18961 true Chr03: 23661954-23680914 Sorghum bicolor
Sobic.003G165800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 23670915-23680914 Sorghum bicolor
Sobic.003G165800 10.0kb downstream 10.0kb downstream 18961 true Chr03: 23651954-23670914 Sorghum bicolor
Sobic.003G165800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 23651954-23661953 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175520 5267 Panicoideae View MSA
124577483 5269 Grass View MSA
122044486 5273 Angiosperm View MSA
121346404 5274 Embryophyte View MSA
123426309 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.74        
cufflinks 0.495       Low
cufflinks 0.41       Low
cufflinks 0.628       Low
cufflinks 2.8       High
cufflinks 1.629        
cufflinks 1.731        
cufflinks 2.486       High
cufflinks 1.372        
cufflinks 1.494        
cufflinks 1.181        
cufflinks 1.396        
cufflinks 1.275        
cufflinks 1.475        
cufflinks 1.343        
cufflinks 0.464       Low
cufflinks 1.613        
cufflinks 1.672        
cufflinks 0.891       Low
cufflinks 1.426        
cufflinks 1.702        
cufflinks 2.133        
cufflinks 1.458        
cufflinks 1.562        
cufflinks 0.54       Low
cufflinks 0.834       Low
cufflinks 1.086        
cufflinks 1.195        
cufflinks 2.86       High
cufflinks 1.907        

0 Strain