Gene : Sobic.003G262400 S. bicolor v3.1.1
Defline:  weakly similar to Os01g0689600 protein Genomic Order:  2762
Name:  ? Sobic.003G262400 Secondary Identifier:  ? PAC:37918369
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G262400 0.5kb upstream 0.5kb upstream 3998 true Chr03: 60023680-60027677 Sorghum bicolor
Sobic.003G262400 0.5kb upstream 0.5kb upstream 500 false Chr03: 60027178-60027677 Sorghum bicolor
Sobic.003G262400 0.5kb downstream 0.5kb downstream 3998 true Chr03: 60023180-60027177 Sorghum bicolor
Sobic.003G262400 0.5kb downstream 0.5kb downstream 500 false Chr03: 60023180-60023679 Sorghum bicolor
Sobic.003G262400 1.0kb upstream 1.0kb upstream 4498 true Chr03: 60023680-60028177 Sorghum bicolor
Sobic.003G262400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 60027178-60028177 Sorghum bicolor
Sobic.003G262400 1.0kb downstream 1.0kb downstream 4498 true Chr03: 60022680-60027177 Sorghum bicolor
Sobic.003G262400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 60022680-60023679 Sorghum bicolor
Sobic.003G262400 2.0kb upstream 2.0kb upstream 5498 true Chr03: 60023680-60029177 Sorghum bicolor
Sobic.003G262400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 60027178-60029177 Sorghum bicolor
Sobic.003G262400 2.0kb downstream 2.0kb downstream 5498 true Chr03: 60021680-60027177 Sorghum bicolor
Sobic.003G262400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 60021680-60023679 Sorghum bicolor
Sobic.003G262400 5.0kb upstream 5.0kb upstream 8498 true Chr03: 60023680-60032177 Sorghum bicolor
Sobic.003G262400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 60027178-60032177 Sorghum bicolor
Sobic.003G262400 5.0kb downstream 5.0kb downstream 8498 true Chr03: 60018680-60027177 Sorghum bicolor
Sobic.003G262400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 60018680-60023679 Sorghum bicolor
Sobic.003G262400 10.0kb upstream 10.0kb upstream 13498 true Chr03: 60023680-60037177 Sorghum bicolor
Sobic.003G262400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 60027178-60037177 Sorghum bicolor
Sobic.003G262400 10.0kb downstream 10.0kb downstream 13498 true Chr03: 60013680-60027177 Sorghum bicolor
Sobic.003G262400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 60013680-60023679 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191706 5267 Panicoideae View MSA
124577068 5269 Grass View MSA
122049776 5273 Angiosperm View MSA
121311586 5274 Embryophyte View MSA
123348863 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.745        
cufflinks 1.548       Low
cufflinks 2.423        
cufflinks 4.763       High
cufflinks 2.803        
cufflinks 9.595       High
cufflinks 2.028        
cufflinks 1.727       Low
cufflinks 4.619        
cufflinks 3.442        
cufflinks 2.243        
cufflinks 2.887        
cufflinks 3.259        
cufflinks 2.848        
cufflinks 4.199        
cufflinks 3.139        
cufflinks 2.28        
cufflinks 2.46        
cufflinks 2.677        
cufflinks 3.233        
cufflinks 2.547        
cufflinks 2.738        
cufflinks 2.599        
cufflinks 2.613        
cufflinks 1.803       Low
cufflinks 1.265       Low
cufflinks 3.249        
cufflinks 12.521     High High
cufflinks 2.487        
cufflinks 3.89        

0 Strain