Gene : Sobic.003G219500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12847//PTHR12847:SF4 - ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED // ADAPTIN EAR-BINDING COAT-ASSOCIATED PROTEIN 1 NECAP-1 Genomic Order:  2304
Name:  ? Sobic.003G219500 Secondary Identifier:  ? PAC:37918503
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G219500 0.5kb upstream 0.5kb upstream 4087 true Chr03: 55479259-55483345 Sorghum bicolor
Sobic.003G219500 0.5kb upstream 0.5kb upstream 500 false Chr03: 55479259-55479758 Sorghum bicolor
Sobic.003G219500 0.5kb downstream 0.5kb downstream 4087 true Chr03: 55479759-55483845 Sorghum bicolor
Sobic.003G219500 0.5kb downstream 0.5kb downstream 500 false Chr03: 55483346-55483845 Sorghum bicolor
Sobic.003G219500 1.0kb upstream 1.0kb upstream 4587 true Chr03: 55478759-55483345 Sorghum bicolor
Sobic.003G219500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 55478759-55479758 Sorghum bicolor
Sobic.003G219500 1.0kb downstream 1.0kb downstream 4587 true Chr03: 55479759-55484345 Sorghum bicolor
Sobic.003G219500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 55483346-55484345 Sorghum bicolor
Sobic.003G219500 2.0kb upstream 2.0kb upstream 5587 true Chr03: 55477759-55483345 Sorghum bicolor
Sobic.003G219500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 55477759-55479758 Sorghum bicolor
Sobic.003G219500 2.0kb downstream 2.0kb downstream 5587 true Chr03: 55479759-55485345 Sorghum bicolor
Sobic.003G219500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 55483346-55485345 Sorghum bicolor
Sobic.003G219500 5.0kb upstream 5.0kb upstream 8587 true Chr03: 55474759-55483345 Sorghum bicolor
Sobic.003G219500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 55474759-55479758 Sorghum bicolor
Sobic.003G219500 5.0kb downstream 5.0kb downstream 8587 true Chr03: 55479759-55488345 Sorghum bicolor
Sobic.003G219500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 55483346-55488345 Sorghum bicolor
Sobic.003G219500 10.0kb upstream 10.0kb upstream 13587 true Chr03: 55469759-55483345 Sorghum bicolor
Sobic.003G219500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 55469759-55479758 Sorghum bicolor
Sobic.003G219500 10.0kb downstream 10.0kb downstream 13587 true Chr03: 55479759-55493345 Sorghum bicolor
Sobic.003G219500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 55483346-55493345 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197534 5267 Panicoideae View MSA
124574312 5269 Grass View MSA
122043890 5273 Angiosperm View MSA
121345219 5274 Embryophyte View MSA
123428646 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.399        
cufflinks 2.049       Low
cufflinks 4.362       Low
cufflinks 6.471        
cufflinks 9.564        
cufflinks 9.218        
cufflinks 4.301       Low
cufflinks 4.702       Low
cufflinks 14.433     High High
cufflinks 11.131        
cufflinks 9.56        
cufflinks 9.356        
cufflinks 11.512     High High
cufflinks 9.711        
cufflinks 7.195        
cufflinks 4.63       Low
cufflinks 4.433       Low
cufflinks 4.589       Low
cufflinks 13.11     High High
cufflinks 6.028        
cufflinks 8.217        
cufflinks 10.882        
cufflinks 7.808        
cufflinks 7.796        
cufflinks 4.083       Low
cufflinks 2.061       Low
cufflinks 10.922        
cufflinks 10.528     High  
cufflinks 6.358        
cufflinks 7.979        

0 Strain