Gene : Sobic.003G221500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR16684 - CENTROMERE PROTEIN C Genomic Order:  2325
Name:  ? Sobic.003G221500 Secondary Identifier:  ? PAC:37918279
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G221500 0.5kb upstream 0.5kb upstream 9255 true Chr03: 55720072-55729326 Sorghum bicolor
Sobic.003G221500 0.5kb upstream 0.5kb upstream 500 false Chr03: 55720072-55720571 Sorghum bicolor
Sobic.003G221500 0.5kb downstream 0.5kb downstream 9255 true Chr03: 55720572-55729826 Sorghum bicolor
Sobic.003G221500 0.5kb downstream 0.5kb downstream 500 false Chr03: 55729327-55729826 Sorghum bicolor
Sobic.003G221500 1.0kb upstream 1.0kb upstream 9755 true Chr03: 55719572-55729326 Sorghum bicolor
Sobic.003G221500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 55719572-55720571 Sorghum bicolor
Sobic.003G221500 1.0kb downstream 1.0kb downstream 9755 true Chr03: 55720572-55730326 Sorghum bicolor
Sobic.003G221500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 55729327-55730326 Sorghum bicolor
Sobic.003G221500 2.0kb upstream 2.0kb upstream 10755 true Chr03: 55718572-55729326 Sorghum bicolor
Sobic.003G221500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 55718572-55720571 Sorghum bicolor
Sobic.003G221500 2.0kb downstream 2.0kb downstream 10755 true Chr03: 55720572-55731326 Sorghum bicolor
Sobic.003G221500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 55729327-55731326 Sorghum bicolor
Sobic.003G221500 5.0kb upstream 5.0kb upstream 13755 true Chr03: 55715572-55729326 Sorghum bicolor
Sobic.003G221500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 55715572-55720571 Sorghum bicolor
Sobic.003G221500 5.0kb downstream 5.0kb downstream 13755 true Chr03: 55720572-55734326 Sorghum bicolor
Sobic.003G221500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 55729327-55734326 Sorghum bicolor
Sobic.003G221500 10.0kb upstream 10.0kb upstream 18755 true Chr03: 55710572-55729326 Sorghum bicolor
Sobic.003G221500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 55710572-55720571 Sorghum bicolor
Sobic.003G221500 10.0kb downstream 10.0kb downstream 18755 true Chr03: 55720572-55739326 Sorghum bicolor
Sobic.003G221500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 55729327-55739326 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198065 5267 Panicoideae View MSA
124587152 5269 Grass View MSA
122045185 5273 Angiosperm View MSA
121350045 5274 Embryophyte View MSA
123426660 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.897        
cufflinks 0.69       Low
cufflinks 2.71        
cufflinks 2.713        
cufflinks 6.803       High
cufflinks 3.203        
cufflinks 4.67        
cufflinks 0.862       Low
cufflinks 4.514        
cufflinks 4.567        
cufflinks 4.135        
cufflinks 5.098        
cufflinks 3.868        
cufflinks 3.941        
cufflinks 4.361        
cufflinks 1.714       Low
cufflinks 4.545        
cufflinks 4.995        
cufflinks 1.885        
cufflinks 4.81        
cufflinks 13.895       High
cufflinks 4.774        
cufflinks 4.687        
cufflinks 4.713        
cufflinks 1.215       Low
cufflinks 0.754       Low
cufflinks 3.684        
cufflinks 3.181        
cufflinks 1.625       Low
cufflinks 5.838        

0 Strain