Gene : Sobic.003G247200 S. bicolor v3.1.1
Defline:  (1 of 1) KOG4073 - Pterin carbinolamine dehydratase PCBD/dimerization cofactor of HNF1 Genomic Order:  2596
Name:  ? Sobic.003G247200 Secondary Identifier:  ? PAC:37918861
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G247200 0.5kb upstream 0.5kb upstream 5139 true Chr03: 58596251-58601389 Sorghum bicolor
Sobic.003G247200 0.5kb upstream 0.5kb upstream 500 false Chr03: 58596251-58596750 Sorghum bicolor
Sobic.003G247200 0.5kb downstream 0.5kb downstream 5139 true Chr03: 58596751-58601889 Sorghum bicolor
Sobic.003G247200 0.5kb downstream 0.5kb downstream 500 false Chr03: 58601390-58601889 Sorghum bicolor
Sobic.003G247200 1.0kb upstream 1.0kb upstream 5639 true Chr03: 58595751-58601389 Sorghum bicolor
Sobic.003G247200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 58595751-58596750 Sorghum bicolor
Sobic.003G247200 1.0kb downstream 1.0kb downstream 5639 true Chr03: 58596751-58602389 Sorghum bicolor
Sobic.003G247200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 58601390-58602389 Sorghum bicolor
Sobic.003G247200 2.0kb upstream 2.0kb upstream 6639 true Chr03: 58594751-58601389 Sorghum bicolor
Sobic.003G247200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 58594751-58596750 Sorghum bicolor
Sobic.003G247200 2.0kb downstream 2.0kb downstream 6639 true Chr03: 58596751-58603389 Sorghum bicolor
Sobic.003G247200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 58601390-58603389 Sorghum bicolor
Sobic.003G247200 5.0kb upstream 5.0kb upstream 9639 true Chr03: 58591751-58601389 Sorghum bicolor
Sobic.003G247200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 58591751-58596750 Sorghum bicolor
Sobic.003G247200 5.0kb downstream 5.0kb downstream 9639 true Chr03: 58596751-58606389 Sorghum bicolor
Sobic.003G247200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 58601390-58606389 Sorghum bicolor
Sobic.003G247200 10.0kb upstream 10.0kb upstream 14639 true Chr03: 58586751-58601389 Sorghum bicolor
Sobic.003G247200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 58586751-58596750 Sorghum bicolor
Sobic.003G247200 10.0kb downstream 10.0kb downstream 14639 true Chr03: 58596751-58611389 Sorghum bicolor
Sobic.003G247200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 58601390-58611389 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181699 5267 Panicoideae View MSA
124588275 5269 Grass View MSA
122046446 5273 Angiosperm View MSA
121348467 5274 Embryophyte View MSA
123427509 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.569       High
cufflinks 2.33       Low
cufflinks 4.5        
cufflinks 6.959       High
cufflinks 4.586        
cufflinks 8.256       High
cufflinks 4.068        
cufflinks 2.301       Low
cufflinks 7.922       High
cufflinks 7.703       High
cufflinks 2.64       Low
cufflinks 3.483        
cufflinks 7.925       High
cufflinks 3.153        
cufflinks 7.348       High
cufflinks 3.974        
cufflinks 4.497        
cufflinks 4.494        
cufflinks 2.083       Low
cufflinks 6.556        
cufflinks 5.9        
cufflinks 3.047        
cufflinks 3.139        
cufflinks 3.013        
cufflinks 3.594        
cufflinks 1.816       Low
cufflinks 3.238        
cufflinks 8.127       High
cufflinks 3.868        
cufflinks 6.411        

0 Strain