Gene : Sobic.003G427100 S. bicolor v3.1.1
Defline:  (1 of 1) K15542 - polyadenylation factor subunit 2 (PFS2) Genomic Order:  4488
Name:  ? Sobic.003G427100 Secondary Identifier:  ? PAC:37916740
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G427100 0.5kb upstream 0.5kb upstream 7422 true Chr03: 73053364-73060785 Sorghum bicolor
Sobic.003G427100 0.5kb upstream 0.5kb upstream 500 false Chr03: 73060286-73060785 Sorghum bicolor
Sobic.003G427100 0.5kb downstream 0.5kb downstream 7422 true Chr03: 73052864-73060285 Sorghum bicolor
Sobic.003G427100 0.5kb downstream 0.5kb downstream 500 false Chr03: 73052864-73053363 Sorghum bicolor
Sobic.003G427100 1.0kb upstream 1.0kb upstream 7922 true Chr03: 73053364-73061285 Sorghum bicolor
Sobic.003G427100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 73060286-73061285 Sorghum bicolor
Sobic.003G427100 1.0kb downstream 1.0kb downstream 7922 true Chr03: 73052364-73060285 Sorghum bicolor
Sobic.003G427100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 73052364-73053363 Sorghum bicolor
Sobic.003G427100 2.0kb upstream 2.0kb upstream 8922 true Chr03: 73053364-73062285 Sorghum bicolor
Sobic.003G427100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 73060286-73062285 Sorghum bicolor
Sobic.003G427100 2.0kb downstream 2.0kb downstream 8922 true Chr03: 73051364-73060285 Sorghum bicolor
Sobic.003G427100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 73051364-73053363 Sorghum bicolor
Sobic.003G427100 5.0kb upstream 5.0kb upstream 11922 true Chr03: 73053364-73065285 Sorghum bicolor
Sobic.003G427100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 73060286-73065285 Sorghum bicolor
Sobic.003G427100 5.0kb downstream 5.0kb downstream 11922 true Chr03: 73048364-73060285 Sorghum bicolor
Sobic.003G427100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 73048364-73053363 Sorghum bicolor
Sobic.003G427100 10.0kb upstream 10.0kb upstream 16922 true Chr03: 73053364-73070285 Sorghum bicolor
Sobic.003G427100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 73060286-73070285 Sorghum bicolor
Sobic.003G427100 10.0kb downstream 10.0kb downstream 16922 true Chr03: 73043364-73060285 Sorghum bicolor
Sobic.003G427100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 73043364-73053363 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185804 5267 Panicoideae View MSA
124571829 5269 Grass View MSA
122041977 5273 Angiosperm View MSA
123429083 5275 Viridiplantae View MSA
121345573 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.284        
cufflinks 1.413       Low
cufflinks 3.798       Low
cufflinks 5.665        
cufflinks 13.542     High High
cufflinks 7.511        
cufflinks 7.381        
cufflinks 2.559       Low
cufflinks 11.519        
cufflinks 11.717        
cufflinks 9.052        
cufflinks 10.365        
cufflinks 8.985        
cufflinks 9.359        
cufflinks 7.794        
cufflinks 3.614       Low
cufflinks 7.064        
cufflinks 7.455        
cufflinks 7.488        
cufflinks 6.9        
cufflinks 20.341     High High
cufflinks 8.875        
cufflinks 9.522        
cufflinks 10.404        
cufflinks 3.055       Low
cufflinks 1.296       Low
cufflinks 8.783        
cufflinks 5.467        
cufflinks 5.825        
cufflinks 10.079        

0 Strain