Gene : Sobic.003G313100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR12565//PTHR12565:SF164 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3296
Name:  ? Sobic.003G313100 Secondary Identifier:  ? PAC:37916145
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G313100 0.5kb upstream 0.5kb upstream 3303 true Chr03: 64126967-64130269 Sorghum bicolor
Sobic.003G313100 0.5kb upstream 0.5kb upstream 500 false Chr03: 64126967-64127466 Sorghum bicolor
Sobic.003G313100 0.5kb downstream 0.5kb downstream 3303 true Chr03: 64127467-64130769 Sorghum bicolor
Sobic.003G313100 0.5kb downstream 0.5kb downstream 500 false Chr03: 64130270-64130769 Sorghum bicolor
Sobic.003G313100 1.0kb upstream 1.0kb upstream 3803 true Chr03: 64126467-64130269 Sorghum bicolor
Sobic.003G313100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 64126467-64127466 Sorghum bicolor
Sobic.003G313100 1.0kb downstream 1.0kb downstream 3803 true Chr03: 64127467-64131269 Sorghum bicolor
Sobic.003G313100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 64130270-64131269 Sorghum bicolor
Sobic.003G313100 2.0kb upstream 2.0kb upstream 4803 true Chr03: 64125467-64130269 Sorghum bicolor
Sobic.003G313100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 64125467-64127466 Sorghum bicolor
Sobic.003G313100 2.0kb downstream 2.0kb downstream 4803 true Chr03: 64127467-64132269 Sorghum bicolor
Sobic.003G313100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 64130270-64132269 Sorghum bicolor
Sobic.003G313100 5.0kb upstream 5.0kb upstream 7803 true Chr03: 64122467-64130269 Sorghum bicolor
Sobic.003G313100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 64122467-64127466 Sorghum bicolor
Sobic.003G313100 5.0kb downstream 5.0kb downstream 7803 true Chr03: 64127467-64135269 Sorghum bicolor
Sobic.003G313100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 64130270-64135269 Sorghum bicolor
Sobic.003G313100 10.0kb upstream 10.0kb upstream 12803 true Chr03: 64117467-64130269 Sorghum bicolor
Sobic.003G313100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 64117467-64127466 Sorghum bicolor
Sobic.003G313100 10.0kb downstream 10.0kb downstream 12803 true Chr03: 64127467-64140269 Sorghum bicolor
Sobic.003G313100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 64130270-64140269 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177384 5267 Panicoideae View MSA
124586763 5269 Grass View MSA
122043534 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.068     Low  
cufflinks 0.009     Low Low
cufflinks 3.627       High
cufflinks 2.198        
cufflinks 0.167        
cufflinks 2.072        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.099        
cufflinks 0.011     Low Low
cufflinks 11.47       High
cufflinks 0.133        
cufflinks 0.221        
cufflinks 0.079     Low  
cufflinks 0.236        
cufflinks 0.082        
cufflinks 0.007     Low Low
cufflinks 0.012     Low Low
cufflinks 0.746        
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.352        
cufflinks 0.048     Low  
cufflinks 0.08     Low  
cufflinks 0.011     Low Low
cufflinks 0.004     Low Low
cufflinks 33.988     High High
cufflinks 0.008     Low Low
cufflinks 0.029     Low  
cufflinks 0.3        

0 Strain