Gene : Sobic.003G313800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13878//PTHR13878:SF44 - GULONOLACTONE OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  3303
Name:  ? Sobic.003G313800 Secondary Identifier:  ? PAC:37913416
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G313800 0.5kb upstream 0.5kb upstream 4821 true Chr03: 64196600-64201420 Sorghum bicolor
Sobic.003G313800 0.5kb upstream 0.5kb upstream 500 false Chr03: 64200921-64201420 Sorghum bicolor
Sobic.003G313800 0.5kb downstream 0.5kb downstream 4821 true Chr03: 64196100-64200920 Sorghum bicolor
Sobic.003G313800 0.5kb downstream 0.5kb downstream 500 false Chr03: 64196100-64196599 Sorghum bicolor
Sobic.003G313800 1.0kb upstream 1.0kb upstream 5321 true Chr03: 64196600-64201920 Sorghum bicolor
Sobic.003G313800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 64200921-64201920 Sorghum bicolor
Sobic.003G313800 1.0kb downstream 1.0kb downstream 5321 true Chr03: 64195600-64200920 Sorghum bicolor
Sobic.003G313800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 64195600-64196599 Sorghum bicolor
Sobic.003G313800 2.0kb upstream 2.0kb upstream 6321 true Chr03: 64196600-64202920 Sorghum bicolor
Sobic.003G313800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 64200921-64202920 Sorghum bicolor
Sobic.003G313800 2.0kb downstream 2.0kb downstream 6321 true Chr03: 64194600-64200920 Sorghum bicolor
Sobic.003G313800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 64194600-64196599 Sorghum bicolor
Sobic.003G313800 5.0kb upstream 5.0kb upstream 9321 true Chr03: 64196600-64205920 Sorghum bicolor
Sobic.003G313800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 64200921-64205920 Sorghum bicolor
Sobic.003G313800 5.0kb downstream 5.0kb downstream 9321 true Chr03: 64191600-64200920 Sorghum bicolor
Sobic.003G313800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 64191600-64196599 Sorghum bicolor
Sobic.003G313800 10.0kb upstream 10.0kb upstream 14321 true Chr03: 64196600-64210920 Sorghum bicolor
Sobic.003G313800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 64200921-64210920 Sorghum bicolor
Sobic.003G313800 10.0kb downstream 10.0kb downstream 14321 true Chr03: 64186600-64200920 Sorghum bicolor
Sobic.003G313800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 64186600-64196599 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194289 5267 Panicoideae View MSA
124572566 5269 Grass View MSA
122043536 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.502       High
cufflinks 0.137        
cufflinks 1.09        
cufflinks 0.398        
cufflinks 1.407        
cufflinks 1.405        
cufflinks 0.164        
cufflinks 0.902        
cufflinks 0.084       Low
cufflinks 0.119        
cufflinks 5.359       High
cufflinks 0.056     Low Low
cufflinks 0.083       Low
cufflinks 0.077     Low Low
cufflinks 0.298        
cufflinks 0.194        
cufflinks 0.101       Low
cufflinks 0.095     Low Low
cufflinks 1.744        
cufflinks 0.114        
cufflinks 1.01        
cufflinks 0.416        
cufflinks 0.026     Low Low
cufflinks 0.031     Low Low
cufflinks 0.112        
cufflinks 0.402        
cufflinks 6.932       High
cufflinks 1.85        
cufflinks 1.494        
cufflinks 0.38        

0 Strain