Gene : Sobic.003G328000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR14503//PTHR14503:SF3 - FAMILY NOT NAMED // 50S RIBOSOMAL PROTEIN L34, CHLOROPLASTIC Genomic Order:  3452
Name:  ? Sobic.003G328000 Secondary Identifier:  ? PAC:37917204
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G328000 0.5kb upstream 0.5kb upstream 4370 true Chr03: 65358088-65362457 Sorghum bicolor
Sobic.003G328000 0.5kb upstream 0.5kb upstream 500 false Chr03: 65361958-65362457 Sorghum bicolor
Sobic.003G328000 0.5kb downstream 0.5kb downstream 4370 true Chr03: 65357588-65361957 Sorghum bicolor
Sobic.003G328000 0.5kb downstream 0.5kb downstream 500 false Chr03: 65357588-65358087 Sorghum bicolor
Sobic.003G328000 1.0kb upstream 1.0kb upstream 4870 true Chr03: 65358088-65362957 Sorghum bicolor
Sobic.003G328000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 65361958-65362957 Sorghum bicolor
Sobic.003G328000 1.0kb downstream 1.0kb downstream 4870 true Chr03: 65357088-65361957 Sorghum bicolor
Sobic.003G328000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 65357088-65358087 Sorghum bicolor
Sobic.003G328000 2.0kb upstream 2.0kb upstream 5870 true Chr03: 65358088-65363957 Sorghum bicolor
Sobic.003G328000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 65361958-65363957 Sorghum bicolor
Sobic.003G328000 2.0kb downstream 2.0kb downstream 5870 true Chr03: 65356088-65361957 Sorghum bicolor
Sobic.003G328000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 65356088-65358087 Sorghum bicolor
Sobic.003G328000 5.0kb upstream 5.0kb upstream 8870 true Chr03: 65358088-65366957 Sorghum bicolor
Sobic.003G328000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 65361958-65366957 Sorghum bicolor
Sobic.003G328000 5.0kb downstream 5.0kb downstream 8870 true Chr03: 65353088-65361957 Sorghum bicolor
Sobic.003G328000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 65353088-65358087 Sorghum bicolor
Sobic.003G328000 10.0kb upstream 10.0kb upstream 13870 true Chr03: 65358088-65371957 Sorghum bicolor
Sobic.003G328000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 65361958-65371957 Sorghum bicolor
Sobic.003G328000 10.0kb downstream 10.0kb downstream 13870 true Chr03: 65348088-65361957 Sorghum bicolor
Sobic.003G328000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 65348088-65358087 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181427 5267 Panicoideae View MSA
124588773 5269 Grass View MSA
122044582 5273 Angiosperm View MSA
121344313 5274 Embryophyte View MSA
123425891 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.799        
cufflinks 10.818     High High
cufflinks 9.271       High
cufflinks 4.712        
cufflinks 1.165        
cufflinks 3.237        
cufflinks 18.774     High High
cufflinks 25.057     High High
cufflinks 0.706        
cufflinks 0.542        
cufflinks 0.165       Low
cufflinks 0.15       Low
cufflinks 0.542        
cufflinks 0.144       Low
cufflinks 1.954        
cufflinks 7.497        
cufflinks 19.652     High High
cufflinks 22.727     High High
cufflinks 6.263        
cufflinks 10.446       High
cufflinks 0.984        
cufflinks 0.322        
cufflinks 0.247       Low
cufflinks 0.214       Low
cufflinks 4.095        
cufflinks 9.719     High High
cufflinks 0.178       Low
cufflinks 0.077       Low
cufflinks 32.246     High High
cufflinks 2.514        

0 Strain