Gene : Sobic.003G289900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12276//PTHR12276:SF59 - EPSIN/ENT-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3050
Name:  ? Sobic.003G289900 Secondary Identifier:  ? PAC:37917582
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G289900 0.5kb upstream 0.5kb upstream 4623 true Chr03: 62236473-62241095 Sorghum bicolor
Sobic.003G289900 0.5kb upstream 0.5kb upstream 500 false Chr03: 62236473-62236972 Sorghum bicolor
Sobic.003G289900 0.5kb downstream 0.5kb downstream 4623 true Chr03: 62236973-62241595 Sorghum bicolor
Sobic.003G289900 0.5kb downstream 0.5kb downstream 500 false Chr03: 62241096-62241595 Sorghum bicolor
Sobic.003G289900 1.0kb upstream 1.0kb upstream 5123 true Chr03: 62235973-62241095 Sorghum bicolor
Sobic.003G289900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 62235973-62236972 Sorghum bicolor
Sobic.003G289900 1.0kb downstream 1.0kb downstream 5123 true Chr03: 62236973-62242095 Sorghum bicolor
Sobic.003G289900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 62241096-62242095 Sorghum bicolor
Sobic.003G289900 2.0kb upstream 2.0kb upstream 6123 true Chr03: 62234973-62241095 Sorghum bicolor
Sobic.003G289900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 62234973-62236972 Sorghum bicolor
Sobic.003G289900 2.0kb downstream 2.0kb downstream 6123 true Chr03: 62236973-62243095 Sorghum bicolor
Sobic.003G289900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 62241096-62243095 Sorghum bicolor
Sobic.003G289900 5.0kb upstream 5.0kb upstream 9123 true Chr03: 62231973-62241095 Sorghum bicolor
Sobic.003G289900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 62231973-62236972 Sorghum bicolor
Sobic.003G289900 5.0kb downstream 5.0kb downstream 9123 true Chr03: 62236973-62246095 Sorghum bicolor
Sobic.003G289900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 62241096-62246095 Sorghum bicolor
Sobic.003G289900 10.0kb upstream 10.0kb upstream 14123 true Chr03: 62226973-62241095 Sorghum bicolor
Sobic.003G289900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 62226973-62236972 Sorghum bicolor
Sobic.003G289900 10.0kb downstream 10.0kb downstream 14123 true Chr03: 62236973-62251095 Sorghum bicolor
Sobic.003G289900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 62241096-62251095 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192060 5267 Panicoideae View MSA
124590574 5269 Grass View MSA
122049187 5273 Angiosperm View MSA
121349061 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.424       High
cufflinks 0.197       Low
cufflinks 1.392        
cufflinks 2.077        
cufflinks 1.384        
cufflinks 0.601        
cufflinks 0.393        
cufflinks 0.237       Low
cufflinks 2.665       High
cufflinks 2.352       High
cufflinks 0.63        
cufflinks 1.304        
cufflinks 1.373        
cufflinks 1.078        
cufflinks 1.481        
cufflinks 0.668        
cufflinks 0.378       Low
cufflinks 0.316       Low
cufflinks 0.803        
cufflinks 0.76        
cufflinks 1.199        
cufflinks 0.684        
cufflinks 1.048        
cufflinks 0.806        
cufflinks 0.572        
cufflinks 0.207       Low
cufflinks 2.372       High
cufflinks 17.759     High High
cufflinks 0.229       Low
cufflinks 2.571       High

0 Strain