Gene : Sobic.001G000700 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN Genomic Order:  6
Name:  ? Sobic.001G000700 Secondary Identifier:  ? PAC:37944248
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6842 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G000700 0.5kb upstream 0.5kb upstream 10025 true Chr01: 53281-63305 Sorghum bicolor
Sobic.001G000700 0.5kb upstream 0.5kb upstream 500 false Chr01: 53281-53780 Sorghum bicolor
Sobic.001G000700 0.5kb downstream 0.5kb downstream 10025 true Chr01: 53781-63805 Sorghum bicolor
Sobic.001G000700 0.5kb downstream 0.5kb downstream 500 false Chr01: 63306-63805 Sorghum bicolor
Sobic.001G000700 1.0kb upstream 1.0kb upstream 10525 true Chr01: 52781-63305 Sorghum bicolor
Sobic.001G000700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52781-53780 Sorghum bicolor
Sobic.001G000700 1.0kb downstream 1.0kb downstream 10525 true Chr01: 53781-64305 Sorghum bicolor
Sobic.001G000700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 63306-64305 Sorghum bicolor
Sobic.001G000700 2.0kb upstream 2.0kb upstream 11525 true Chr01: 51781-63305 Sorghum bicolor
Sobic.001G000700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51781-53780 Sorghum bicolor
Sobic.001G000700 2.0kb downstream 2.0kb downstream 11525 true Chr01: 53781-65305 Sorghum bicolor
Sobic.001G000700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 63306-65305 Sorghum bicolor
Sobic.001G000700 5.0kb upstream 5.0kb upstream 14525 true Chr01: 48781-63305 Sorghum bicolor
Sobic.001G000700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48781-53780 Sorghum bicolor
Sobic.001G000700 5.0kb downstream 5.0kb downstream 14525 true Chr01: 53781-68305 Sorghum bicolor
Sobic.001G000700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 63306-68305 Sorghum bicolor
Sobic.001G000700 10.0kb upstream 10.0kb upstream 19525 true Chr01: 43781-63305 Sorghum bicolor
Sobic.001G000700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 43781-53780 Sorghum bicolor
Sobic.001G000700 10.0kb downstream 10.0kb downstream 19525 true Chr01: 53781-73305 Sorghum bicolor
Sobic.001G000700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 63306-73305 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
122180950 5267 Panicoideae View MSA
124585704 5269 Grass View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.783        
cufflinks 0.355       Low
cufflinks 0.794        
cufflinks 1.458       High
cufflinks 0.526        
cufflinks 1.414       High
cufflinks 0.571        
cufflinks 0.335       Low
cufflinks 1.28       High
cufflinks 1.34       High
cufflinks 0.824        
cufflinks 0.926        
cufflinks 0.971        
cufflinks 0.754        
cufflinks 0.86        
cufflinks 0.676        
cufflinks 0.574        
cufflinks 0.618        
cufflinks 0.458        
cufflinks 0.879        
cufflinks 0.451       Low
cufflinks 0.801        
cufflinks 1.02        
cufflinks 0.85        
cufflinks 0.477        
cufflinks 0.201       Low
cufflinks 1.304       High
cufflinks 0.346       Low
cufflinks 0.424       Low
cufflinks 0.74        

0 Strain