Gene : Sobic.003G345400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12210//PTHR12210:SF68 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3629
Name:  ? Sobic.003G345400 Secondary Identifier:  ? PAC:37918853
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G345400 0.5kb upstream 0.5kb upstream 3496 true Chr03: 66662303-66665798 Sorghum bicolor
Sobic.003G345400 0.5kb upstream 0.5kb upstream 500 false Chr03: 66665299-66665798 Sorghum bicolor
Sobic.003G345400 0.5kb downstream 0.5kb downstream 3496 true Chr03: 66661803-66665298 Sorghum bicolor
Sobic.003G345400 0.5kb downstream 0.5kb downstream 500 false Chr03: 66661803-66662302 Sorghum bicolor
Sobic.003G345400 1.0kb upstream 1.0kb upstream 3996 true Chr03: 66662303-66666298 Sorghum bicolor
Sobic.003G345400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 66665299-66666298 Sorghum bicolor
Sobic.003G345400 1.0kb downstream 1.0kb downstream 3996 true Chr03: 66661303-66665298 Sorghum bicolor
Sobic.003G345400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 66661303-66662302 Sorghum bicolor
Sobic.003G345400 2.0kb upstream 2.0kb upstream 4996 true Chr03: 66662303-66667298 Sorghum bicolor
Sobic.003G345400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 66665299-66667298 Sorghum bicolor
Sobic.003G345400 2.0kb downstream 2.0kb downstream 4996 true Chr03: 66660303-66665298 Sorghum bicolor
Sobic.003G345400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 66660303-66662302 Sorghum bicolor
Sobic.003G345400 5.0kb upstream 5.0kb upstream 7996 true Chr03: 66662303-66670298 Sorghum bicolor
Sobic.003G345400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 66665299-66670298 Sorghum bicolor
Sobic.003G345400 5.0kb downstream 5.0kb downstream 7996 true Chr03: 66657303-66665298 Sorghum bicolor
Sobic.003G345400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 66657303-66662302 Sorghum bicolor
Sobic.003G345400 10.0kb upstream 10.0kb upstream 12996 true Chr03: 66662303-66675298 Sorghum bicolor
Sobic.003G345400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 66665299-66675298 Sorghum bicolor
Sobic.003G345400 10.0kb downstream 10.0kb downstream 12996 true Chr03: 66652303-66665298 Sorghum bicolor
Sobic.003G345400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 66652303-66662302 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183215 5267 Panicoideae View MSA
124578665 5269 Grass View MSA
122050524 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121311967 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.758       Low
cufflinks 16.881     High  
cufflinks 17.326     High High
cufflinks 17.353     High High
cufflinks 8.829       Low
cufflinks 22.297     High High
cufflinks 13.381     High  
cufflinks 8.833     High Low
cufflinks 14.751     High  
cufflinks 15.363     High  
cufflinks 11.738        
cufflinks 17.707     High High
cufflinks 13.61     High  
cufflinks 14.562     High  
cufflinks 14.895     High  
cufflinks 24.273     High High
cufflinks 12.815     High  
cufflinks 13.618     High  
cufflinks 17.558     High High
cufflinks 17.211     High  
cufflinks 8.427       Low
cufflinks 12.868     High  
cufflinks 14.403     High  
cufflinks 12.523     High  
cufflinks 26.33     High High
cufflinks 12.551     High  
cufflinks 11.992     High  
cufflinks 5.733       Low
cufflinks 9.89        
cufflinks 11.412        

0 Strain