Gene : Sobic.001G053500 S. bicolor v3.1.1
Defline:  Predicted protein Genomic Order:  540
Name:  ? Sobic.001G053500 Secondary Identifier:  ? PAC:37939407
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G053500 0.5kb upstream 0.5kb upstream 2427 true Chr01: 3974571-3976997 Sorghum bicolor
Sobic.001G053500 0.5kb upstream 0.5kb upstream 500 false Chr01: 3974571-3975070 Sorghum bicolor
Sobic.001G053500 0.5kb downstream 0.5kb downstream 2427 true Chr01: 3975071-3977497 Sorghum bicolor
Sobic.001G053500 0.5kb downstream 0.5kb downstream 500 false Chr01: 3976998-3977497 Sorghum bicolor
Sobic.001G053500 1.0kb upstream 1.0kb upstream 2927 true Chr01: 3974071-3976997 Sorghum bicolor
Sobic.001G053500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3974071-3975070 Sorghum bicolor
Sobic.001G053500 1.0kb downstream 1.0kb downstream 2927 true Chr01: 3975071-3977997 Sorghum bicolor
Sobic.001G053500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3976998-3977997 Sorghum bicolor
Sobic.001G053500 2.0kb upstream 2.0kb upstream 3927 true Chr01: 3973071-3976997 Sorghum bicolor
Sobic.001G053500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3973071-3975070 Sorghum bicolor
Sobic.001G053500 2.0kb downstream 2.0kb downstream 3927 true Chr01: 3975071-3978997 Sorghum bicolor
Sobic.001G053500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3976998-3978997 Sorghum bicolor
Sobic.001G053500 5.0kb upstream 5.0kb upstream 6927 true Chr01: 3970071-3976997 Sorghum bicolor
Sobic.001G053500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3970071-3975070 Sorghum bicolor
Sobic.001G053500 5.0kb downstream 5.0kb downstream 6927 true Chr01: 3975071-3981997 Sorghum bicolor
Sobic.001G053500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3976998-3981997 Sorghum bicolor
Sobic.001G053500 10.0kb upstream 10.0kb upstream 11927 true Chr01: 3965071-3976997 Sorghum bicolor
Sobic.001G053500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3965071-3975070 Sorghum bicolor
Sobic.001G053500 10.0kb downstream 10.0kb downstream 11927 true Chr01: 3975071-3986997 Sorghum bicolor
Sobic.001G053500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3976998-3986997 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994770 5273 Angiosperm View MSA
122193733 5267 Panicoideae View MSA
124585583 5269 Grass View MSA
121264986 5274 Embryophyte View MSA
123303402 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.673       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.008     Low  
cufflinks 0.008     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  

0 Strain