Gene : Sobic.003G365300 S. bicolor v3.1.1
Defline:  (1 of 1) K17917 - sorting nexin-1/2 (SNX1_2) Genomic Order:  3839
Name:  ? Sobic.003G365300 Secondary Identifier:  ? PAC:37915046
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G365300 0.5kb upstream 0.5kb upstream 4587 true Chr03: 68191997-68196583 Sorghum bicolor
Sobic.003G365300 0.5kb upstream 0.5kb upstream 500 false Chr03: 68196084-68196583 Sorghum bicolor
Sobic.003G365300 0.5kb downstream 0.5kb downstream 4587 true Chr03: 68191497-68196083 Sorghum bicolor
Sobic.003G365300 0.5kb downstream 0.5kb downstream 500 false Chr03: 68191497-68191996 Sorghum bicolor
Sobic.003G365300 1.0kb upstream 1.0kb upstream 5087 true Chr03: 68191997-68197083 Sorghum bicolor
Sobic.003G365300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 68196084-68197083 Sorghum bicolor
Sobic.003G365300 1.0kb downstream 1.0kb downstream 5087 true Chr03: 68190997-68196083 Sorghum bicolor
Sobic.003G365300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 68190997-68191996 Sorghum bicolor
Sobic.003G365300 2.0kb upstream 2.0kb upstream 6087 true Chr03: 68191997-68198083 Sorghum bicolor
Sobic.003G365300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 68196084-68198083 Sorghum bicolor
Sobic.003G365300 2.0kb downstream 2.0kb downstream 6087 true Chr03: 68189997-68196083 Sorghum bicolor
Sobic.003G365300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 68189997-68191996 Sorghum bicolor
Sobic.003G365300 5.0kb upstream 5.0kb upstream 9087 true Chr03: 68191997-68201083 Sorghum bicolor
Sobic.003G365300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 68196084-68201083 Sorghum bicolor
Sobic.003G365300 5.0kb downstream 5.0kb downstream 9087 true Chr03: 68186997-68196083 Sorghum bicolor
Sobic.003G365300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 68186997-68191996 Sorghum bicolor
Sobic.003G365300 10.0kb upstream 10.0kb upstream 14087 true Chr03: 68191997-68206083 Sorghum bicolor
Sobic.003G365300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 68196084-68206083 Sorghum bicolor
Sobic.003G365300 10.0kb downstream 10.0kb downstream 14087 true Chr03: 68181997-68196083 Sorghum bicolor
Sobic.003G365300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 68181997-68191996 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196092 5267 Panicoideae View MSA
124577955 5269 Grass View MSA
122045293 5273 Angiosperm View MSA
121345603 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.317     High  
cufflinks 9.446     High Low
cufflinks 24.68     High  
cufflinks 32.622     High High
cufflinks 16.19     High  
cufflinks 20.054     High  
cufflinks 17.353     High  
cufflinks 8.181       Low
cufflinks 23.453     High  
cufflinks 24.703     High  
cufflinks 22.772     High  
cufflinks 25.682     High  
cufflinks 19.563     High  
cufflinks 26.274     High  
cufflinks 21.347     High  
cufflinks 22.618     High  
cufflinks 19.063     High  
cufflinks 19.053     High  
cufflinks 16.401     High  
cufflinks 24.55     High  
cufflinks 16.538     High  
cufflinks 27.796     High High
cufflinks 29.54     High High
cufflinks 27.371     High High
cufflinks 16.521     High  
cufflinks 8.406     High Low
cufflinks 23.078     High  
cufflinks 12.696     High Low
cufflinks 12.802     High Low
cufflinks 22.581     High  

0 Strain