Protein Family : Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 122196092

Method ID:  5267 Method Name:  Panicoideae
Sequence Alignment:  View MSA Member Count:  12

12 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Seita.5G391000 (1 of 1) PTHR10555:SF122 - SORTING NEXIN 1 S. italica v2.2 4235   scaffold_5: 42113353-42117587
Zm00008a013250 (1 of 2) K17917 - sorting nexin-1/2 (SNX1_2) Z. mays PH207 v1.1 3903   chr03: 176070159-176074061
Pavir.5KG656400 (1 of 2) K17917 - sorting nexin-1/2 (SNX1_2) P. virgatum v4.1 4777   Chr05K: 104887936-104892712
Pavir.8KG182900 (1 of 2) K17917 - sorting nexin-1/2 (SNX1_2) P. virgatum v4.1 4161   Chr08K: 30846864-30851024
Sobic.003G365300 (1 of 1) K17917 - sorting nexin-1/2 (SNX1_2) S. bicolor v3.1.1 4087   Chr03: 68191997-68196083
Zm00001d012286 (1 of 1) KOG2273//KOG2527 - Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins // Sorting nexin SNX11 Z. mays RefGen_V4 4198   8: 171908319-171912516
Zm00001d042761 (1 of 3) K17917 - sorting nexin-1/2 (SNX1_2) Z. mays RefGen_V4 4663   3: 179083938-179088600
Pahal.5G080400 (1 of 1) K17917 - sorting nexin-1/2 (SNX1_2) P. hallii v3.1 8015   Chr05: 4971339-4979353
PhHAL.5G081700 (1 of 1) K17917 - sorting nexin-1/2 (SNX1_2) P. hallii HAL v2.1 4745   Chr05: 4520544-4525288
Misin05G327900 (1 of 2) K17917 - sorting nexin-1/2 (SNX1_2) M. sinensis v7.1 4067   Chr05: 99577741-99581807
Misin06G327000 (1 of 2) K17917 - sorting nexin-1/2 (SNX1_2) M. sinensis v7.1 4205   Chr06: 102885904-102890108
Sevir.5G396200 (1 of 1) K17917 - sorting nexin-1/2 (SNX1_2) S. viridis v2.1 4470   Chr_05: 41558892-41563361

12 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Seita.5G391000.1.p S. italica v2.2 122196092 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae
Pavir.8KG182900.1.p P. virgatum v4.1 122196092 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 2 5267 Panicoideae
Pavir.5KG656400.1.p P. virgatum v4.1 122196092 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 2 5267 Panicoideae
Sobic.003G365300.1.p S. bicolor v3.1.1 122196092 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae
Zm00001d042761_P001 Z. mays RefGen_V4 122196092 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 2 5267 Panicoideae
Zm00001d012286_P001 Z. mays RefGen_V4 122196092 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 2 5267 Panicoideae
Pahal.5G080400.1.p P. hallii v3.1 122196092 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae
Misin05G327900.1.p M. sinensis v7.1 122196092 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 2 5267 Panicoideae
Misin06G327000.1.p M. sinensis v7.1 122196092 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 2 5267 Panicoideae
Sevir.5G396200.1.p S. viridis v2.1 122196092 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae
Zm00008a013250_P01 Z. mays PH207 v1.1 122196092 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae
PhHAL.5G081700.1.p P. hallii HAL v2.1 122196092 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins 1 5267 Panicoideae