Gene : Sobic.005G007900 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR13832:SF199 - PROTEIN PHOSPHATASE 2C 65-RELATED Genomic Order:  75
Name:  ? Sobic.005G007900 Secondary Identifier:  ? PAC:37925148
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G007900 0.5kb upstream 0.5kb upstream 4136 true Chr05: 626684-630819 Sorghum bicolor
Sobic.005G007900 0.5kb upstream 0.5kb upstream 500 false Chr05: 626684-627183 Sorghum bicolor
Sobic.005G007900 0.5kb downstream 0.5kb downstream 4136 true Chr05: 627184-631319 Sorghum bicolor
Sobic.005G007900 0.5kb downstream 0.5kb downstream 500 false Chr05: 630820-631319 Sorghum bicolor
Sobic.005G007900 1.0kb upstream 1.0kb upstream 4636 true Chr05: 626184-630819 Sorghum bicolor
Sobic.005G007900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 626184-627183 Sorghum bicolor
Sobic.005G007900 1.0kb downstream 1.0kb downstream 4636 true Chr05: 627184-631819 Sorghum bicolor
Sobic.005G007900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 630820-631819 Sorghum bicolor
Sobic.005G007900 2.0kb upstream 2.0kb upstream 5636 true Chr05: 625184-630819 Sorghum bicolor
Sobic.005G007900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 625184-627183 Sorghum bicolor
Sobic.005G007900 2.0kb downstream 2.0kb downstream 5636 true Chr05: 627184-632819 Sorghum bicolor
Sobic.005G007900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 630820-632819 Sorghum bicolor
Sobic.005G007900 5.0kb upstream 5.0kb upstream 8636 true Chr05: 622184-630819 Sorghum bicolor
Sobic.005G007900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 622184-627183 Sorghum bicolor
Sobic.005G007900 5.0kb downstream 5.0kb downstream 8636 true Chr05: 627184-635819 Sorghum bicolor
Sobic.005G007900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 630820-635819 Sorghum bicolor
Sobic.005G007900 10.0kb upstream 10.0kb upstream 13636 true Chr05: 617184-630819 Sorghum bicolor
Sobic.005G007900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 617184-627183 Sorghum bicolor
Sobic.005G007900 10.0kb downstream 10.0kb downstream 13636 true Chr05: 627184-640819 Sorghum bicolor
Sobic.005G007900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 630820-640819 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196181 5267 Panicoideae View MSA
124590709 5269 Grass View MSA
122048670 5273 Angiosperm View MSA
121311066 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.604       Low
cufflinks 1.304       Low
cufflinks 1.143       Low
cufflinks 2.279        
cufflinks 8.592       High
cufflinks 4.114        
cufflinks 2.812        
cufflinks 10.266     High High
cufflinks 3.207        
cufflinks 4.667        
cufflinks 5.86        
cufflinks 6.388        
cufflinks 3.235        
cufflinks 5.153        
cufflinks 11.318       High
cufflinks 1.171       Low
cufflinks 2.336        
cufflinks 2.566        
cufflinks 1.893       Low
cufflinks 3.04        
cufflinks 10.667       High
cufflinks 6.758        
cufflinks 3.552        
cufflinks 4.333        
cufflinks 2.818        
cufflinks 2.895        
cufflinks 3.417        
cufflinks 1.282       Low
cufflinks 8.499       High
cufflinks 13.334     High High

0 Strain