Gene : Sobic.005G016900 S. bicolor v3.1.1
Genomic Order:  157 Name:  ? Sobic.005G016900
Secondary Identifier:  ? PAC:37925268
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.005G016900 0.5kb upstream 0.5kb upstream 1330 true Chr05: 1503852-1505181 Sorghum bicolor
Sobic.005G016900 0.5kb upstream 0.5kb upstream 500 false Chr05: 1504682-1505181 Sorghum bicolor
Sobic.005G016900 0.5kb downstream 0.5kb downstream 1330 true Chr05: 1503352-1504681 Sorghum bicolor
Sobic.005G016900 0.5kb downstream 0.5kb downstream 500 false Chr05: 1503352-1503851 Sorghum bicolor
Sobic.005G016900 1.0kb upstream 1.0kb upstream 1830 true Chr05: 1503852-1505681 Sorghum bicolor
Sobic.005G016900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1504682-1505681 Sorghum bicolor
Sobic.005G016900 1.0kb downstream 1.0kb downstream 1830 true Chr05: 1502852-1504681 Sorghum bicolor
Sobic.005G016900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1502852-1503851 Sorghum bicolor
Sobic.005G016900 2.0kb upstream 2.0kb upstream 2830 true Chr05: 1503852-1506681 Sorghum bicolor
Sobic.005G016900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1504682-1506681 Sorghum bicolor
Sobic.005G016900 2.0kb downstream 2.0kb downstream 2830 true Chr05: 1501852-1504681 Sorghum bicolor
Sobic.005G016900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1501852-1503851 Sorghum bicolor
Sobic.005G016900 5.0kb upstream 5.0kb upstream 5830 true Chr05: 1503852-1509681 Sorghum bicolor
Sobic.005G016900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1504682-1509681 Sorghum bicolor
Sobic.005G016900 5.0kb downstream 5.0kb downstream 5830 true Chr05: 1498852-1504681 Sorghum bicolor
Sobic.005G016900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1498852-1503851 Sorghum bicolor
Sobic.005G016900 10.0kb upstream 10.0kb upstream 10830 true Chr05: 1503852-1514681 Sorghum bicolor
Sobic.005G016900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1504682-1514681 Sorghum bicolor
Sobic.005G016900 10.0kb downstream 10.0kb downstream 10830 true Chr05: 1493852-1504681 Sorghum bicolor
Sobic.005G016900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1493852-1503851 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192751 5267 Panicoideae View MSA
124573113 5269 Grass View MSA
122048705 5273 Angiosperm View MSA
121347737 5274 Embryophyte View MSA
123380610 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.047     Low Low
cufflinks 0.106        
cufflinks 0.811        
cufflinks 2.933        
cufflinks 0.341        
cufflinks 5.998       High
cufflinks 0.046     Low Low
cufflinks 0.082        
cufflinks 8.907       High
cufflinks 3.997       High
cufflinks 0.033     Low Low
cufflinks 0.079     Low  
cufflinks 6.936       High
cufflinks 0.464        
cufflinks 1.707        
cufflinks 3.315        
cufflinks 0.024     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.676       High
cufflinks 0.208        
cufflinks 0.029     Low Low
cufflinks 0.056     Low  
cufflinks 0.018     Low Low
cufflinks 0.064     Low  
cufflinks 0.144        
cufflinks 0.198        
cufflinks 2.393        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.401       High

0 Strain