Gene : Sobic.001G111500 S. bicolor v3.1.1
Defline:  (1 of 1) K12120 - phytochrome A (PHYA) Genomic Order:  1152
Name:  ? Sobic.001G111500 Secondary Identifier:  ? PAC:37942103
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G111500 0.5kb upstream 0.5kb upstream 13366 true Chr01: 8707787-8721152 Sorghum bicolor
Sobic.001G111500 0.5kb upstream 0.5kb upstream 500 false Chr01: 8707787-8708286 Sorghum bicolor
Sobic.001G111500 0.5kb downstream 0.5kb downstream 13366 true Chr01: 8708287-8721652 Sorghum bicolor
Sobic.001G111500 0.5kb downstream 0.5kb downstream 500 false Chr01: 8721153-8721652 Sorghum bicolor
Sobic.001G111500 1.0kb upstream 1.0kb upstream 13866 true Chr01: 8707287-8721152 Sorghum bicolor
Sobic.001G111500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8707287-8708286 Sorghum bicolor
Sobic.001G111500 1.0kb downstream 1.0kb downstream 13866 true Chr01: 8708287-8722152 Sorghum bicolor
Sobic.001G111500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8721153-8722152 Sorghum bicolor
Sobic.001G111500 2.0kb upstream 2.0kb upstream 14866 true Chr01: 8706287-8721152 Sorghum bicolor
Sobic.001G111500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8706287-8708286 Sorghum bicolor
Sobic.001G111500 2.0kb downstream 2.0kb downstream 14866 true Chr01: 8708287-8723152 Sorghum bicolor
Sobic.001G111500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8721153-8723152 Sorghum bicolor
Sobic.001G111500 5.0kb upstream 5.0kb upstream 17866 true Chr01: 8703287-8721152 Sorghum bicolor
Sobic.001G111500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8703287-8708286 Sorghum bicolor
Sobic.001G111500 5.0kb downstream 5.0kb downstream 17866 true Chr01: 8708287-8726152 Sorghum bicolor
Sobic.001G111500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8721153-8726152 Sorghum bicolor
Sobic.001G111500 10.0kb upstream 10.0kb upstream 22866 true Chr01: 8698287-8721152 Sorghum bicolor
Sobic.001G111500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8698287-8708286 Sorghum bicolor
Sobic.001G111500 10.0kb downstream 10.0kb downstream 22866 true Chr01: 8708287-8731152 Sorghum bicolor
Sobic.001G111500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8721153-8731152 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195645 5267 Panicoideae View MSA
124571484 5269 Grass View MSA
122046553 5273 Angiosperm View MSA
121310619 5274 Embryophyte View MSA
123348057 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 110.781     High  
cufflinks 126.115     High  
cufflinks 83.198     High  
cufflinks 133.07     High  
cufflinks 89.318     High  
cufflinks 34.065     High Low
cufflinks 28.684     High Low
cufflinks 158.519     High High
cufflinks 55.764     High  
cufflinks 40.279     High  
cufflinks 47.282     High  
cufflinks 45.102     High  
cufflinks 82.021     High  
cufflinks 66.053     High  
cufflinks 141.118     High  
cufflinks 366.604     High High
cufflinks 19.836     High Low
cufflinks 26.669     High Low
cufflinks 243.513     High High
cufflinks 22.806     High Low
cufflinks 16.843     High Low
cufflinks 114.555     High  
cufflinks 23.126     High Low
cufflinks 32.094     High Low
cufflinks 317.875     High High
cufflinks 186.213     High High
cufflinks 127.046     High  
cufflinks 89.15     High  
cufflinks 47.769     High  
cufflinks 82.69     High  

0 Strain