Gene : Sobic.001G113700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10106//PTHR10106:SF19 - CYTOCHROME B561-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1178
Name:  ? Sobic.001G113700 Secondary Identifier:  ? PAC:37939020
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.001G113700 0.5kb upstream 0.5kb upstream 3161 true Chr01: 8907255-8910415 Sorghum bicolor
Sobic.001G113700 0.5kb upstream 0.5kb upstream 500 false Chr01: 8909916-8910415 Sorghum bicolor
Sobic.001G113700 0.5kb downstream 0.5kb downstream 3161 true Chr01: 8906755-8909915 Sorghum bicolor
Sobic.001G113700 0.5kb downstream 0.5kb downstream 500 false Chr01: 8906755-8907254 Sorghum bicolor
Sobic.001G113700 1.0kb upstream 1.0kb upstream 3661 true Chr01: 8907255-8910915 Sorghum bicolor
Sobic.001G113700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8909916-8910915 Sorghum bicolor
Sobic.001G113700 1.0kb downstream 1.0kb downstream 3661 true Chr01: 8906255-8909915 Sorghum bicolor
Sobic.001G113700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8906255-8907254 Sorghum bicolor
Sobic.001G113700 2.0kb upstream 2.0kb upstream 4661 true Chr01: 8907255-8911915 Sorghum bicolor
Sobic.001G113700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8909916-8911915 Sorghum bicolor
Sobic.001G113700 2.0kb downstream 2.0kb downstream 4661 true Chr01: 8905255-8909915 Sorghum bicolor
Sobic.001G113700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8905255-8907254 Sorghum bicolor
Sobic.001G113700 5.0kb upstream 5.0kb upstream 7661 true Chr01: 8907255-8914915 Sorghum bicolor
Sobic.001G113700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8909916-8914915 Sorghum bicolor
Sobic.001G113700 5.0kb downstream 5.0kb downstream 7661 true Chr01: 8902255-8909915 Sorghum bicolor
Sobic.001G113700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8902255-8907254 Sorghum bicolor
Sobic.001G113700 10.0kb upstream 10.0kb upstream 12661 true Chr01: 8907255-8919915 Sorghum bicolor
Sobic.001G113700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8909916-8919915 Sorghum bicolor
Sobic.001G113700 10.0kb downstream 10.0kb downstream 12661 true Chr01: 8897255-8909915 Sorghum bicolor
Sobic.001G113700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8897255-8907254 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183390 5267 Panicoideae View MSA
124578345 5269 Grass View MSA
122048589 5273 Angiosperm View MSA
123429174 5275 Viridiplantae View MSA
121311029 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.234       Low
cufflinks 0.164       Low
cufflinks 0.187       Low
cufflinks 0.824        
cufflinks 1.363        
cufflinks 1.082        
cufflinks 1.36        
cufflinks 0.953        
cufflinks 2.204        
cufflinks 2.015        
cufflinks 2.01        
cufflinks 1.912        
cufflinks 12.195     High High
cufflinks 2.352        
cufflinks 0.829        
cufflinks 0.266       Low
cufflinks 1.375        
cufflinks 1.145        
cufflinks 2.114        
cufflinks 1.493        
cufflinks 0.059     Low Low
cufflinks 0.839        
cufflinks 1.617        
cufflinks 1.354        
cufflinks 0.349       Low
cufflinks 0.174       Low
cufflinks 1.714        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.68        
cufflinks 0.292       Low

0 Strain